Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0036 ATGAATTGTTTCTCGTGTTTCACCTCTCAGAGAAGTAAGAAAAACCTTGCCGCCGGAGACCATGAATCTGCAACACAAGATCATGTCGCTTCAAAACCACCGGATAATGGAACCCAAGGTCAGAGCCCAAATATTCAAGCGCAAACATTCACCTTTCGTGAGCTAGCAACCGCCACCAAGAACTTCAGGCAGGAATGCTTGTTAGGAGAAGGTGGATTCGGAAGAGTGTACAAGGGCACCATTCCGGCAACCGGCAAGGTGGTAGCTGTGAAGCAATTGGACCGAAATGGGATGAATGGCAGCAAGGATTTTCTTACAGAGGTTGCAGTTTTAAGTCGCCTGAACCACGAAAATCTGGTGAATCTAGTTGGTTACTGTGCCGATGGGGATCAACGTCTTCTGGTCTATGAATACATGCCAGGGGGCTCTGTATATGATCGTCTTTTTGAGGTAGAGGAAGGCAAGTCTCCGTTGGATTGGTTCAACAGAATGAAAATAGCGTCGGGAGCAGCGAGAGGACTTGAGTATCTACATGACAAGGCCAATCCACCAGTTGTTTACAGGGACTTGAAATCCTCCAATATCCTGTTGGATGGCAATCTTAACCCCAAACTATCTGATTTTGGGCTCAACAAGCTTTCCGGAGGAGACAGGACAAACCTTATATCCCCCGGAGTTACGGGTACTTATGGCTACTCTGCTCCCGAGTATATTAGGACCGGACACCTCACCTTGAAATCAGACGTCTACGGTTTTGGAGTTGTGCTGCTGGAGCTCATCACCGGACGGCGAGCCATTGATACTACCAAACCCAATGAGGAGCAAAATTTAGTTTCATGGGCACAGCCTTTATTCAGAAATCCAAAACAATTCCCAGAAATGGCGGATCCGCTGCTGAAGAAGCATTTCCCGGAAAAGGATCTAAATCAAGCAGTAGCAGTAGCGGCCATGTGCCTCCAGGAGGAGGAAGGGGCGAGGCCTTTGATGAGTGACGTGGTAACTGCTCTGAGTTTCCTGTCCATGGTTCCACCGGAGGTAATTCCAGCATCGGTGTCGACCTCCACCTTGCCCCCGCAGGATGATGGTTCCGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGATGATTCTGATGAGACGGAGGGAAGATCAAGCCGCAGAAGCAGCGGGAGTTGGGAAGAGGAAAGCGTGACATCGAGCAAGAAATCGCGAAATTTGAGCCAGAAGGAAAGTCGCTCCAGAGATTTAAAGCAGAAGAGTAGCAAGAAGGTTGGAGGAAGAGTGTTGAGCAGAAAGATTAGCAGTAGAAAATCATCGAGAAGCAGGAAGATGAGCAGGGAATGGGAGGAAGGAGGAGGAGAGGGAATGCACGAGAGAGGGAGCAGCAGGATGTCTGAAAGAGATATATCGTTTGGGCTCACCAGCAGTGGGGAGATCATGCGCCGCGGCGGCGGCGGCGGCAGTGACGACAGCAACAGGGGGTTGCAGCACTCCCATACCGCCAAACATCCCGCTTCCAAGGATCCTGGCAGGGGACGACTCGCCGCTTCTAGCGCCAAAGTCTAA 1584 0.5088 MNCFSCFTSQRSKKNLAAGDHESATQDHVASKPPDNGTQGQSPNIQAQTFTFRELATATKNFRQECLLGEGGFGRVYKGTIPATGKVVAVKQLDRNGMNGSKDFLTEVAVLSRLNHENLVNLVGYCADGDQRLLVYEYMPGGSVYDRLFEVEEGKSPLDWFNRMKIASGAARGLEYLHDKANPPVVYRDLKSSNILLDGNLNPKLSDFGLNKLSGGDRTNLISPGVTGTYGYSAPEYIRTGHLTLKSDVYGFGVVLLELITGRRAIDTTKPNEEQNLVSWAQPLFRNPKQFPEMADPLLKKHFPEKDLNQAVAVAAMCLQEEEGARPLMSDVVTALSFLSMVPPEVIPASVSTSTLPPQDDGSEEEEEEEEEEEEEEEEDDDSDETEGRSSRRSSGSWEEESVTSSKKSRNLSQKESRSRDLKQKSSKKVGGRVLSRKISSRKSSRSRKMSREWEEGGGEGMHERGSSRMSERDISFGLTSSGEIMRRGGGGGSDDSNRGLQHSHTAKHPASKDPGRGRLAASSAKV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0036 527 PANTHER OS07G0668900 PROTEIN 3 343 - -
Alju01g0036 527 MobiDBLite consensus disorder prediction 403 428 - -
Alju01g0036 527 MobiDBLite consensus disorder prediction 349 527 - -
Alju01g0036 527 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Alju01g0036 527 SMART serkin_6 62 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0036 527 MobiDBLite consensus disorder prediction 430 445 - -
Alju01g0036 527 Pfam Protein kinase domain 64 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0036 527 MobiDBLite consensus disorder prediction 446 471 - -
Alju01g0036 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Alju01g0036 527 MobiDBLite consensus disorder prediction 501 515 - -
Alju01g0036 527 CDD STKc_IRAK 68 336 - -
Alju01g0036 527 Coils Coil 359 385 - -
Alju01g0036 527 MobiDBLite consensus disorder prediction 360 385 - -
Alju01g0036 527 MobiDBLite consensus disorder prediction 29 43 - -
Alju01g0036 527 ProSiteProfiles Protein kinase domain profile. 62 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0036 527 Gene3D Transferase(Phosphotransferase) domain 1 139 342 - -
Alju01g0036 527 FunFam probable serine/threonine-protein kinase RLCKVII 35 138 - -
Alju01g0036 527 Gene3D Phosphorylase Kinase; domain 1 35 138 - -
Alju01g0036 527 FunFam Serine/threonine-protein kinase PBS1 139 352 - -
Alju01g0036 527 SUPERFAMILY Protein kinase-like (PK-like) 41 341 IPR011009 -
Alju01g0036 527 MobiDBLite consensus disorder prediction 15 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0036 Alju-ChrAlju01 357009 358978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0036 1 374 Glycoside Hydrolase AT3G07070 60.759 5.39e-161 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Alju01g0036 Pkinase 8e-47 CL0016