Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0034 ATGCTATTACTAGGGGTTGTGATCAAATCCCTTTTAATCCTCTCGAATAAATATCAGTGTCCGAGCACGCAGCCGGGATCCCTCTGTTCTTTCTCCTCGTCGTTCATCCCATTCCAATTCCCAATCAAGCGCAGAGTCTCCCAGACTCACCGACCTTCCGATCCATTTTCAACTTGGTTTATGAGCTCGAAGGAGAGACCCACTCTTGGTGGTACGCGGATTAAGACCCGCAAACGGAATATTGCAGCGCCACTGGACCCTGCAGCATTTTCGGATGCAGTGGTCCAGATTTACTTGGATAATGCTGGTGATCTCGAACTTGTTGCTAAGAGCATTGAGTCCTCAGACCTTAACTTCTCACGATACGGTGACACCTTCTTTGAGGTTGTTTTCACTGGGGGGCGTACGCAACCTGGAACTACCAAGCCTGATGAGGGGGAGCGGCATCCTTACTCTATAATTGAGTGTGAGCCGAAGCGTGAAGTCATATCACCGTCCGTAATCTACATACAGAAGATTTTGCGGCGGAGGCCTTTTCTTATCAAGAATCTTGAAAATGTCATGCGAAAATTTCTGCAGTCCTTGGAACTTTTTGAGGAAAATGAGAGGAAAAAGCTGGCAATCTTCACAGCACTTGCATTCTCCCAGAAGCTATCTGGTCTCCCACCAGAAACTGTGTTCCAGCCACTTCTCAAAGATAATCTTGTGGCCAAAGGGTTAGTTCTATCGTTTATAACTGACTTCTTTAAGGAGTATCTGGTTGACAACAGCCTTGATGACCTCATATCGATTCTGAAGCGGGGAAAAGTGGAGGACAATCTATTGGACTTCTTTCCACCTGCAAAAAGATCTAATGATGCTTTTGCTGATCATTTCACCAAGGAAGGACTAGCAGCCTTGGTGGAGTATAATGAGAAGAAAATTTTTGAGGTGAAACTTAAGGAGATGAAATCTGCTCTGACAACCCAGATAACAGAGGAAACTGATATATCTGAAGTCATCGAAACTGTGAAGCTACGTGTTAGAGATGCTAAGTTACCAGACACAGAGGCTGTGAGGGTTCTGTGGGATGTCTTAATGGACGCTGTCCAGTGGTCAGGGAAAAACCAGCAACAGAATGCAAATGCAGCCCTGCGTCAGGTAAAAACTTGGGCGGAACTGTTGAATACCTTCTGCACCAGTGGGAAGCTTGAGCTGGAACTGATGTACAAAGTACAGATGCAATGCTACGAGGATGCTAAACTGATGAAGCTCTTCCCGGAGATTATTAGGTCGCTTTATGACCAAGATGTGCTGGCAGAGGATACCATTCTCCATTGGTTCCGGAAAGGAACAAACACCAAGGGAAGGCAAACCTTTGTGAAGGCCCTGGAACCCTTTGTGAACTGGCTGGAGGAGGCGGAAGAGGAGGATTAG 1416 0.4633 MLLLGVVIKSLLILSNKYQCPSTQPGSLCSFSSSFIPFQFPIKRRVSQTHRPSDPFSTWFMSSKERPTLGGTRIKTRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELVAKSIESSDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHPYSIIECEPKREVISPSVIYIQKILRRRPFLIKNLENVMRKFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLSFITDFFKEYLVDNSLDDLISILKRGKVEDNLLDFFPPAKRSNDAFADHFTKEGLAALVEYNEKKIFEVKLKEMKSALTTQITEETDISEVIETVKLRVRDAKLPDTEAVRVLWDVLMDAVQWSGKNQQQNANAALRQVKTWAELLNTFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILHWFRKGTNTKGRQTFVKALEPFVNWLEEAEEED 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0034 471 Gene3D - 302 471 - -
Alju01g0034 471 FunFam ARM repeat superfamily protein 303 471 - -
Alju01g0034 471 Pfam eIF4-gamma/eIF5/eIF2-epsilon 398 471 IPR003307 GO:0005515
Alju01g0034 471 SUPERFAMILY ARM repeat 313 468 IPR016024 -
Alju01g0034 471 ProSiteProfiles W2 domain profile. 306 471 IPR003307 GO:0005515
Alju01g0034 471 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 62 471 - -
Alju01g0034 471 Coils Coil 181 201 - -
Alju01g0034 471 CDD W2_eIF5C_like 276 470 IPR043510 -
Alju01g0034 471 SMART 542_3 385 470 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0034 Alju-ChrAlju01 346781 353214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0034 360 467 Eukaryotic Initiation Factors Gene Family AT2G34970 31.818 3.55e-09 57.4