Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0008 ATGGATAAGGGAGAATCAACGACAGGGAAGAGGAAAAAGAGGAAGGAGGAGGAAGAAATAATGTGCGGCATATTTGCTTATCTTAACTATAACGTCAACAAAGAAAGGAGGTACATCCTTCAGGTACTATTCAATGGGCTCAGGCGATTGGAATATCGTGGCTATGATTCCGCTGGCATCGCCATCGACTCCTCACCTGCACTCGATCCAAACACTTCTCAATGCTCGTCAATTTCCATCACCCCTCCCCCTCTTATCTTCCGTCAAGAGGGCAACATTGAATCCCTTGTCAAATCCGTTTACCAAGAAGTTGCTGAAGTGGAATTAAATTTGGAGGAATCTTTCCCCACCCATGCTGGAATCGCGCATACACGATGGGCAACTCACGGAGAGCCTTCTCCAAGGAATAGTCATCCTCAGAGCTCTGGCTCAGGAGATGACTTTTTGGTTGTTCACAATGGGGTTATTACTAATTACGAGGTTTTGAAGGAAACATTGATCCGGCATGGGTTCACATTTGAATCTGAAACTGACACAGAAGTCATTCCAAAACTTGCAAAGTTTGTTTTTGATAAAGCAAATGAGGCAGAAGGCGACCAAGTTGTTACCTTTAGTCAAGTTGTTCTGGAAGTTATGAGGCATCTAGATGGAGCATATGCCCTTATTTTCAAAAGCCGACATTATCCAAATGAGTTGATTGCTTGCAAGCGTGGCAGCCCACTACTCATAGGTGTAAAAGAATTGAGAGAAAATATGGTTGCTGGCTCAGCATTTGAGGATAATAACTCTCTATCAAAAAATGGCCACCCCCAAGAGTTCTTTATATCTAGTGATGCTAATGCCGTGGTAGAACATACAAATAGGTATTTGGAGATCCGGGATGGTGAAGTTGTTCACCTCAAGGATGGTGGAGTTTCAATTTTGAAGTTTGAAAATGATAAAGTAAAAAATGGTAGTTCCCATTATAGACCTGCTTCAGTGCAGCGGGCTTTATCAGTTCTTGAGATGGAGGTTGAGCAAATTAATAAAGGACATTATGAGCATTACATGCAGAAAGAAATTCATGAGCAACCTGAATCTCTTACAACCACAATGAGGGGGAGGCTTAGTCGGGGAGGATCGAGTAAATTAAAAACCGTACTGTTGGGTGGATTGAAGGATCACCTTAAAACAATCCGAAGAAGTAGAAGGATTGTTTTCATCGGTTGTGGTACTAGTTACAATGCAGCTTTGGCATCTAGGCCGATATTGGAAGAACTTACTGGAATCCCTGTTACCATGGAAATCGCTAGTGATCTATTGGATCGGCAAGGACCAATATACAGAGAAGATACTGCTGTTTTTGTTAGTCAATCTGGTGAAACTGCTGATACTTTACTTGCACTGCAATATGCTTTAGATAATGGTGCCTTATGTGTTGGCATAACAAATACTGTTGGTAGTGCAATAGCAAGAAATACACATTGTGGTGTACATATAAATGCTGGTGCTGAGATAGGTGTGGCAAGTACCAAGGCTTACACAAGTCAAATAGTAGTGATGGCAATGTTGGCACTTGCAATAGGAGGTGACACAATTTCTAATCAAGCCAGGAGAGAAGCAATCATCGATGGTCTCTTGGACCTGCCAAATAAAGTCAGGGAGGTGCTGAAGCAAGACCAGGAGATGAAGGATCTGGCGAAGCTGTTAATGTCTGAGCAGTCTCTTCTTGTCTTTGGAAGAGGATTTAACTATGCAACAGCTCTGGAGGGAGCTTTGAAAGTAAAGGAAGTGGCTCTTACACACAGTGAAGGAATACTTGCTGGTGAAATGAAGCATGGTCCTTTGGCCTTGGTGGATGAAAATCTTCCAATTATTGTTTTAGCTACTCGTGATGCTTGCTTCAGCAAGCAGCAGTCTGTCATTCGGCAACTTCATGCTCGCAAAGGCCGTCTTATAGTTATGTGTTCAAAAGGGGATGCTGCTTTGGTGTCTACTGGTGAATCTTGTAGGGTAATTGAAGTTCCACATGTTGAAGACTGTCTTCAACCTGTAATTAATATAATTCCATTACAGTTACTGGCATATCATCTCACTGTGCTTAAAGGATTAAATGTTGACCAGCCTCGAAATCTCGCCAAGAGTGTCACAACCCAATGA 2139 0.4236 MDKGESTTGKRKKRKEEEEIMCGIFAYLNYNVNKERRYILQVLFNGLRRLEYRGYDSAGIAIDSSPALDPNTSQCSSISITPPPLIFRQEGNIESLVKSVYQEVAEVELNLEESFPTHAGIAHTRWATHGEPSPRNSHPQSSGSGDDFLVVHNGVITNYEVLKETLIRHGFTFESETDTEVIPKLAKFVFDKANEAEGDQVVTFSQVVLEVMRHLDGAYALIFKSRHYPNELIACKRGSPLLIGVKELRENMVAGSAFEDNNSLSKNGHPQEFFISSDANAVVEHTNRYLEIRDGEVVHLKDGGVSILKFENDKVKNGSSHYRPASVQRALSVLEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLSRGGSSKLKTVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALASRPILEELTGIPVTMEIASDLLDRQGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISNQARREAIIDGLLDLPNKVREVLKQDQEMKDLAKLLMSEQSLLVFGRGFNYATALEGALKVKEVALTHSEGILAGEMKHGPLALVDENLPIIVLATRDACFSKQQSVIRQLHARKGRLIVMCSKGDAALVSTGESCRVIEVPHVEDCLQPVINIIPLQLLAYHLTVLKGLNVDQPRNLAKSVTTQ 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0008 712 ProSiteProfiles SIS domain profile. 388 527 IPR001347 GO:0097367|GO:1901135
Alju01g0008 712 Pfam Glutamine amidotransferase domain 116 235 - -
Alju01g0008 712 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 22 323 IPR029055 -
Alju01g0008 712 CDD GFAT 22 300 IPR047084 -
Alju01g0008 712 SUPERFAMILY SIS domain 343 711 IPR046348 GO:0097367|GO:1901135
Alju01g0008 712 Gene3D - 344 711 - -
Alju01g0008 712 ProSiteProfiles SIS domain profile. 559 702 IPR001347 GO:0097367|GO:1901135
Alju01g0008 712 Gene3D - 548 697 - -
Alju01g0008 712 Pfam SIS domain 563 694 IPR001347 GO:0097367|GO:1901135
Alju01g0008 712 Pfam SIS domain 392 519 IPR001347 GO:0097367|GO:1901135
Alju01g0008 712 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 22 303 IPR017932 -
Alju01g0008 712 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 21 712 - -
Alju01g0008 712 CDD SIS_GlmS_GlmD_1 397 522 IPR035466 -
Alju01g0008 712 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 22 323 - -
Alju01g0008 712 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 22 309 IPR029055 -
Alju01g0008 712 CDD SIS_GlmS_GlmD_2 554 710 IPR035490 -
Alju01g0008 712 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 344 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0008 Alju-ChrAlju01 120592 129356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0008 41 244 PRT Gene Family AT2G16570 24.519 2.65e-06 48.9