Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03888 ATGATTGTATCTTTAATCATTTTAAGTTTCTCTTTCTCTCTCTCTCTCTCTGTGTGCGTATGTGTTGAAATTCCCCTTTTTCCCCTGTTTGAGTCGTGGATTTCTTTGGATAGTTTGGGTTGCTTGCTAGTTGCTATTATTGGAATTGGTATTTGTTTAAGCATGTCAGTGGCGATGAGAAATAAACCTCTTGAATTTGGGAGGCCTGTAAAAAGTAAAAGAAAATTCAAGGACTTATTGCTCCAAAAGGATAATCAATTTTGTGCTGATTGTAATGCTCCACAACCTAAATGGGCGTCGGCTAATATTGGAGTATTTTTATGCTTTAAATGTTACAATGTGCACAGAAGTCTTGATACTCATATATCAAGGGTTTTGTCTGTGGGGGATGAATGGTCAGATGATGATATTGATGCAATGATTGAAGTTGGAGGAAATTCTTCTGCTAATTCAATTTATGAAGCTTATATTCCAGAAGGATATGCAAAACCTCGTCCAGATTCCAGTCAGGAAGAGCGCACAAAATTCATTCGGTCAAAATATGAATATCAAGAATTTTTGAAACCAAGTTTGCGCATTGTGTCTTCGAAATCTTCTCATCAATCAAGTTTCTCCAAACATAATGCCGATAGTTTCCGGAGCTCTTATGAATCCAGTTTCTCCAAACGTGATGCACATAGTTTTCGAAGCTCTCATGAACCCAGTTTCTCCATGCGTAGTGCGGATAGCTTTCGAAGCTGTCATGAATCCAGTTTCTCCCAATGTGATGCAGATAGTTTTCGAAGCACTACTAGTTTAAAGAATCTGGTAATTTTATTCTAG 822 0.3747 MIVSLIILSFSFSLSLSVCVCVEIPLFPLFESWISLDSLGCLLVAIIGIGICLSMSVAMRNKPLEFGRPVKSKRKFKDLLLQKDNQFCADCNAPQPKWASANIGVFLCFKCYNVHRSLDTHISRVLSVGDEWSDDDIDAMIEVGGNSSANSIYEAYIPEGYAKPRPDSSQEERTKFIRSKYEYQEFLKPSLRIVSSKSSHQSSFSKHNADSFRSSYESSFSKRDAHSFRSSHEPSFSMRSADSFRSCHESSFSQCDADSFRSTTSLKNLVILF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03888 273 Gene3D Arf GTPase activating protein 48 194 IPR038508 -
Aip10g03888 273 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 66 219 IPR044518 GO:0005096|GO:0005543
Aip10g03888 273 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 66 219 - -
Aip10g03888 273 SMART arf_gap_3 74 194 IPR001164 GO:0005096
Aip10g03888 273 ProSiteProfiles ARF GTPase-activating proteins domain profile. 73 201 IPR001164 GO:0005096
Aip10g03888 273 CDD ArfGap 76 181 - -
Aip10g03888 273 Pfam Putative GTPase activating protein for Arf 74 188 IPR001164 GO:0005096
Aip10g03888 273 PRINTS HIV Rev interacting protein signature 104 121 IPR001164 GO:0005096
Aip10g03888 273 PRINTS HIV Rev interacting protein signature 85 104 IPR001164 GO:0005096
Aip10g03888 273 SUPERFAMILY ArfGap/RecO-like zinc finger 73 189 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03888 Aip-Chr10 136666000 136670770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03888 66 218 C2H2 Transcription Factor Family AT4G21160 62.112 9.50e-68 211