Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03880 ATGGAAGGCATGAAGAGTGAGAAGGAAACACTAGCATCAAGTAATAGCGACCCTAAGAAGAAGATGATTAGTGATAGAAAGGCTTCTTGGGGTAAGCTTGTTGGCCGTGTTGATTCCCTCAATTTGGAGGCTGCAAGAATTCCTTCCACCTATCACCGCCATTTGATGAGTTGGAGAACAACATTGAGCTTAGCATTTCAAAGCGTAGGGGTGATATATGGGGACATTGGAACATCTCCACTTTATGTGTATTCAAGTACCTTCACCGATGGTATAAAAAACACTGATGATCTTCTTGGATGCCTCTCTCTCATCATCTATACCATTGCACTTGTTCCCTTCCTTAAGTATATTTGCATCGTTCTGTGGGCTAATGACAACGGTGATGGTGGCACATTTGCATTGTACTCTTTGATTTGCCGGTACGCTAAGGTGAGCTTAATTCCAAATCATCAACCAGAGGATATGCAACTTTCAAATTACAAACTGGAAACACCATCAAACCAATTAAAGAGGGCACACAAGATTAAGGACAAGTTAGAGAATAGTAAGTTCGCTCAGCTTCTGCTTTTTGTTGTGACTATCATGTCAACCTCTATGGTCATCGGAGATGGAATTCTCACACCATCCATTTCAGCAGTACTTTCTGCAGTTGGCGGGATCAAATCAAAGAGCGAGTCACTTGGCCAAGGTGCTGTTGTGGGGATCTCAATAGCAATCTTGATAGTTTTGTTCTGTGTCCAAAGATATGGCACTGATAAAGTGGGCACAACGTTTGCCCCAATAATCATTGTGTGGTTTTCATTCATTGGAGGCATAGGCCTCTTCAACTTGTTCAAATATGAAGTTGGTGTGCTTCGAGCTTTGAATCCAAAGTACATTGTAGATTACTTCAGAAGGAATGGTAAAGACGGATGGATTTCTCTGGGTGGAATTTTTCTATGCATTACAGGGACTGAGGCCATGTTTGCAGACTTGGGTCACTTCAGTGTGCGAGCAGTTCAACTTAGTTTCTCCTTTATTACATTTCCTGCACTAGTGTGTGCATACAGTGGACAAGCTGCATATCTTAGGAAGTTCCCGGACCATGTGGCGGATACATTTTATGACTCTATACCTAGTCCAATATATTGGCCAACATTCGTTGTGGCAGTTGCTGCTGCCATCATTGCAAGCCAGGCTATGATTTCAGGGGCATATTCTATAATCCAGCAGTCTCTAAGTTTGGGATGCTTCCCCAGTGTTAGTGTCATACATACCTCTGCCAAGTATGAAGGTCAGGTTTACATACCCGAGATCAACTACATTCTTATGATCTCGTGCGTCATAGTCACCGCCGCCTTCCAAACCACAAATAATATTGGCCATGCTTATGGGATTGCTGTGTGCATGGTGATGCTTGTCACAACAGCCATGGTTGCTCTTATAATGCTTGTTATATGGAAGACAAATATATGGTGGATTCTTCTTTTTGTTTTGGTATTTGGTTCGATCGAGATTGTGTATTTATCATCCATGTTAACTAAGTTCATTCAAGGAGGCTTTCTTCCACTAGTACTTGCTTTGTTCTTGATGGCTATCATGGCCATTTGGCATTACACACACAAAAAGAGGTATATGTTTGAGGCCAACAACAAGGTTTCTAGTGAACATCTAAGAGAAATAGTAAGCAAACAGGTTGTATCCAGAATACCTGGAGTAGCACTTCTATTCTCAGAGCTAGTTGAAGGAGTTCCACCCATTTTTGCTAAAGTTGTTGCCAACATTCCTCATATCCACTCTGTTGTTGTGTTTGTTTCCATGAAGTCCATCCCTATTAGCAGAGTTGTATTAGAAGAGAGATTCCTTTTCAGACAAGTTCAGCCAAAGGAATATAGAATCTTCCGCTGTGTGGTGAGGTATGGCTACAATGATGTGATTGGGGAACCAAAAGAGTTTGAGGAACAATTAGTTCAACAGCTAAAAGAGTTTTTAAGACTTCAAAATTTTACTCACGTATACGAGGGGGTGGGAGTTGGTGATGCTGAGCAACCAGATTACCATTTGCAAGTGAGTATCCAACAACAAAAATCCAGCAGTGAACGGTTTGCTAAGGATGAAAAAGGTTCTTCTAATCAAATAATGCCTGCATCTTTTTGTTCGCATCAAGTGGAAGACCAAGTGGTGCAGTCCCAATCTGGTCAACAACATTCAAGGTCTAACCCTGCCATAAATGTGTCCCGTGCTTCATCAGGCTCCATTCAGTCATTTGGAGCAGTTAGTAGAATCTCAAACCCAACTCTGCAGGTAATAGAAGAGGAGATAGCATTTGTGCAGAAAGCAATGGAGAAAAGTGTGGTCTACATGTTGGGAGAAGCCGAGGTGGTGGCAGAACCCAATGCATCCGTTTTAAAGAAAATAGTGGTCAATCATATCTACAGTTTCTTGAGGAGAAACTTCAGGCAGGGAGAACATCTAATTGCAATCCCACGTTCAAAGCTACTCAGGATTGGAATGACATATGAGATATGA 2511 0.4182 MEGMKSEKETLASSNSDPKKKMISDRKASWGKLVGRVDSLNLEAARIPSTYHRHLMSWRTTLSLAFQSVGVIYGDIGTSPLYVYSSTFTDGIKNTDDLLGCLSLIIYTIALVPFLKYICIVLWANDNGDGGTFALYSLICRYAKVSLIPNHQPEDMQLSNYKLETPSNQLKRAHKIKDKLENSKFAQLLLFVVTIMSTSMVIGDGILTPSISAVLSAVGGIKSKSESLGQGAVVGISIAILIVLFCVQRYGTDKVGTTFAPIIIVWFSFIGGIGLFNLFKYEVGVLRALNPKYIVDYFRRNGKDGWISLGGIFLCITGTEAMFADLGHFSVRAVQLSFSFITFPALVCAYSGQAAYLRKFPDHVADTFYDSIPSPIYWPTFVVAVAAAIIASQAMISGAYSIIQQSLSLGCFPSVSVIHTSAKYEGQVYIPEINYILMISCVIVTAAFQTTNNIGHAYGIAVCMVMLVTTAMVALIMLVIWKTNIWWILLFVLVFGSIEIVYLSSMLTKFIQGGFLPLVLALFLMAIMAIWHYTHKKRYMFEANNKVSSEHLREIVSKQVVSRIPGVALLFSELVEGVPPIFAKVVANIPHIHSVVVFVSMKSIPISRVVLEERFLFRQVQPKEYRIFRCVVRYGYNDVIGEPKEFEEQLVQQLKEFLRLQNFTHVYEGVGVGDAEQPDYHLQVSIQQQKSSSERFAKDEKGSSNQIMPASFCSHQVEDQVVQSQSGQQHSRSNPAINVSRASSGSIQSFGAVSRISNPTLQVIEEEIAFVQKAMEKSVVYMLGEAEVVAEPNASVLKKIVVNHIYSFLRRNFRQGEHLIAIPRSKLLRIGMTYEI 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03880 836 Pfam K+ potassium transporter 65 638 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip10g03880 836 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 23 835 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip10g03880 836 MobiDBLite consensus disorder prediction 1 23 - -
Aip10g03880 836 PANTHER POTASSIUM TRANSPORTER 5 23 835 - -
Aip10g03880 836 TIGRFAM kup: potassium uptake protein 64 836 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03880 Aip-Chr10 136556267 136560432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03880 4 836 Inorganic Solute Cotransporters AT4G13420 57.126 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03880 K03549 - fve:101305171 1034.63