Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03864 ATGCGGGGGAACAATTATAACTGCATTCCTATAACACCCAGATCGAGATTAGAGAGGCTACTGAGGGAGAGAGAGCTAAGAAAGTCGAACAAGTATTTTGAGGAGACAAGAGATGGCAACAAAGAAGCGGAACAAGTTTATAGTGACTCGTTAACAGAGAGTGACAGTTTTAATTCTCTCAATGAGGAAGACATTTCTGAAGCACTTGCTGTTGCGAGAGTATTTCCAGATAGAAGTCAAAGGCCGGATGAGCGGCCACGCAAACAACGGTTGTTGGTGGTAGCTAATAGGTTGCCTGTCTCAGCTGTTAGGGAGGGTGAGGACTCATTCCACCTTGAGATCAGTGTTGGCGGCCTAGTCAGTGCACTTTTAGGCAAGAAAAAGTTTTTTGAAACTAGATGGATTGGGTGGGCTGGTGTGAATGTATCTGATGGTGTTGGGCAGAAAGCATTGACTAAAGCTTTAGCTGAAATGAGATGCATTCCAGTTTTTCTTGATGAGCAGATTGTGAATCAATACTATAACGGTTACTGCAACAACATCTTATGGCCTCTTTTTCATTATCTTGGGCTTCCACAAGAAGACAGACTTGCTACCACTCGCAGCTTCCAATCTCAATTTGATGCATATAAGAAGGCAAACCAGATGTTTGCTGATGTAGTAAATAGGTACTATAAGGAGGGAGATGTTGTTTGGTGCCATGATTACCATCTAATGTTCCTTCCAAAATGTTTAAAAGAATACAATGACAAAATGAAAGTTGGCTGGTTTCTTCATACTCCTTTTCCTTCCTCGGAAATACATAGGACTCTGCCATCAAGAACAGAGCTATTGAGATCTGTACTTGCTGCTGACTTGGTGGGATTCCATACTTATGATTATGCCAGACATTTTGTAAGTGCTTGTACTCGCATTCTTGGGCTTGAAGGGACACCTGAAGGAGTAGAAGATCAAGGGAAGCTAACTCGTGTGGCTGCGTTTCCTATTGGGATTGATTCTGATCGATTTATTCGAGCCCTTGAACTCCCTGAAGTCCAGGAGCACATGAAAGAACTGAAAGAAAGATTTGCAGGCAGAAAGGTAATGTTGGGCGTTGATCGTCTTGATATGATAAAAGGAATTCCGCAGAAGATATTGGCATTTGAAAAGTTCCTTGAGGAGAACCCACGCTGGCGTGATAAAGTTGTCTTGTTGCAAATTGCTGTACCAACTAGGACAGATGTTCCTGATTATCAAAAGCTTACAAGTCAGGTGCATGAGATTGTTGGCCGCATCAATGGAAGATTTGGAACCCTTACGGCTGTTCCAATACACCATCTGGATCGATCGCTTGACTTTTATGCATTATGTGCACTTTATGCTGTTACTGATGTAGCACTTGTTACATCTCTAAGGGATGGAATGAATCTTGTCAGCTATGAATTCGTTGCATGTCAAGCTTCTAAGAAAGGGGTTCTCATTTTAAGTGAGTTTGCAGGTGCTGCACAGTCTCTTGGTGCTGGTGCTATCTTGGTAAATCCATGGAATGTCACAGAGGTTGCTGCTTCTATTGGTTATGCACTGGATATGCCAGCCGATGAAAGAGAAAAACGGCATCTAGTTAACTTCAAGCACGTGACGACTCACACTTCACAAGAATGGGCAGCAACTTTTGTGAGTGAACTGAATGATACGATTGTCGAAGCGCAGCTTAGGACAAGACAAGTTCCACCATTACTTCCCAAGGAAGTGGCAGTTGATTGTTACTCAAAATCCAATAACCGATTAATTATACTGGGTTTCAATGCCACTTTGACAGAACCAGTGGATGCCCTTGGAAGGGGTGGTCAAATTAGAGAAATGGAACTTAAATTGCACCCAAATATAAAGAAGCCTTTAAAGAAGTTGTCTGATGATCCAAAGACAACAATTGTTGTTCTGAGTGGGAGTGATCGAACTGTCCTGGACAAAAATTTCAGGGAATACAATATGTGGTTAGCAGCAGAAAATGGGATGTTTCTACGACATACGTCAGGTGAATGGATGACAACCATGCCTGAAAATTTACATATGGATTGGGTTGATAGCGTAAAGCATGTTTTTGAGTATTTTACCGAAAGAACTCCGCGGTCTCATTTTGAGCTTCGTGAGACTTCAGTTGTATGGAATTACAAGTATGCAGATATTGAGTTTGGAAGGCTTCAAGCAAGAGATCTGCTTCAGCATCTTTGGACAGGACCGATATCCAATGCATCTCTTGACGTTGTCCAAGGTGGTCGATCTGTTGAGGTCAGGGCAATTGGTGTCTCAAAGGGAGCAGCTATTGATCGCATCTTAGGAGAGATCGTTCATGATAAAGGAATGAAGGCTCCAATTGATTATGTCTTATGCATCGGGCACTTTCTAGCAAAGGATGAAGATGTCTATAAATTTTTTGAACCAGAGCTTCCTTGTGAATCATCACCATTAGCAAGAGCTATGCCTTCCAATTCTTTAAGGTCATCACCTCTGACAAAATTTCCAGTCAGCAAAAATGGGTCCAAGGCAGCTCGCTATAAGAAGCAACGTTCAATGTCAACCATAGAAAAGTTAGAAATCGATCATGCAAGGGGCGATCCATGGATACCAACTTATCATGATAGAACATCACTACATGAGGGCTCTTCAGTGCTCGATCTTCAAGGCGATAATTACTTCTCTTGTGCTGTTGCACGCAAGAGATCAAGTGCACGCTACTTACTCAAAACCTCAGATGATGTTGTCAATCTCTTAAGTAACATGGCAGATCATTCATCAACACGATCAACTTAA 2790 0.4211 MRGNNYNCIPITPRSRLERLLRERELRKSNKYFEETRDGNKEAEQVYSDSLTESDSFNSLNEEDISEALAVARVFPDRSQRPDERPRKQRLLVVANRLPVSAVREGEDSFHLEISVGGLVSALLGKKKFFETRWIGWAGVNVSDGVGQKALTKALAEMRCIPVFLDEQIVNQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNRYYKEGDVVWCHDYHLMFLPKCLKEYNDKMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALELPEVQEHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPRWRDKVVLLQIAVPTRTDVPDYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFYALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNVTEVAASIGYALDMPADEREKRHLVNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPKEVAVDCYSKSNNRLIILGFNATLTEPVDALGRGGQIREMELKLHPNIKKPLKKLSDDPKTTIVVLSGSDRTVLDKNFREYNMWLAAENGMFLRHTSGEWMTTMPENLHMDWVDSVKHVFEYFTERTPRSHFELRETSVVWNYKYADIEFGRLQARDLLQHLWTGPISNASLDVVQGGRSVEVRAIGVSKGAAIDRILGEIVHDKGMKAPIDYVLCIGHFLAKDEDVYKFFEPELPCESSPLARAMPSNSLRSSPLTKFPVSKNGSKAARYKKQRSMSTIEKLEIDHARGDPWIPTYHDRTSLHEGSSVLDLQGDNYFSCAVARKRSSARYLLKTSDDVVNLLSNMADHSSTRST 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03864 929 Gene3D - 614 774 IPR023214 -
Aip10g03864 929 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 50 919 IPR001830 GO:0003824|GO:0005992
Aip10g03864 929 SUPERFAMILY HAD-like 588 776 IPR036412 -
Aip10g03864 929 CDD GT20_TPS 90 556 IPR001830 GO:0003824|GO:0005992
Aip10g03864 929 Gene3D - 680 760 - -
Aip10g03864 929 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 50 919 - -
Aip10g03864 929 MobiDBLite consensus disorder prediction 33 56 - -
Aip10g03864 929 Pfam Glycosyltransferase family 20 90 556 IPR001830 GO:0003824|GO:0005992
Aip10g03864 929 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 89 559 - -
Aip10g03864 929 CDD HAD_TPP 589 808 - -
Aip10g03864 929 Pfam Trehalose-phosphatase 613 809 IPR003337 GO:0003824|GO:0005992
Aip10g03864 929 Gene3D Glycogen Phosphorylase B; 338 540 - -
Aip10g03864 929 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 90 556 IPR012766 GO:0003825|GO:0005992
Aip10g03864 929 Gene3D Glycogen Phosphorylase B; 82 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03864 Aip-Chr10 136376815 136383877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03864 1 926 Trehalose Biosynthesis Gene Families AT1G78580 74.710 0.0 1395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03864 K16055 - gmx:100816642 1562.74