Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03856 ATGGAATTCAGAATCTTCTTTGCTTTATCAATCATTGCTTTGAGTTGTTTCAGATGGATGAGGTTTGCAGAATCCAAATTACCACAGGAAGAAGTTGATGCTCTTGGAGAAATCACTACCATGATGGGTGTCACCCACTGGGAATTTGATGGTGATACTTGTCAAATTAAAAAGGTGACATTAGAGCCACCCAGTGAAGCTAAAAGCAGCATTGGTTGTGAGTACCATCCTGAAAAGGACAACTTCTCTCATGTAGTAAGGATTGAGTTCAAATGGTACAATCTTCCTGGCACTCTTCCACCTCAGATGGTTAAGCTTCCTTACCTCAGAGAAATTGATCTTTCTCTCAACTACCTAAATGGTACCATCCCAAAGGAATGGGCTTCAATGAAACTGACTACAATTGCTCTAATGGCTAATCGTTTATCGGGGGAGATTCCTAAGGAGTTGGGAAATATTACAACTCTAGTGAACCTGGACCTTGAAGCAAACCAATTATCTGGTCATGTACCCTCTCAACTTGGAAATCTGATTAACCTGCAAAGATTGGTTCTATCATCCAATAATTTGTCTGGGACCCTACCAGAGACATTTGCTCTATTACATAATTTGACAGAGTTTAGGATAAGTGATAATAGTTTCAGTGGAAAAATACCCAGCTTCATTCAGAACTGGAAGCTACTTCAAAGACTAGAGATGCATGCAAGTGGACTGGAGGGACCAATCCCATCAAATATATCTCTTTTGAGTAATTTAACTATTTTGAGGATTAGTGACATAGATGGTCCAAGTCAGGATTTTCCAGTTTTAAGCAGCATGAAAAAAATGAGAAGATTGGTTTTGAGAAACTGCAATATTACTGGAGAGATTCCTAGTGACATCTGGAAAATGGAGAATTTGAAAATGCTGGATGTGAGTTTTAATCAGTTGGTTGGCGAAATTCCAACTATCAAACCTGCAGCACCAATGACTTTTATCTTCCTAACTGGCAACAAACTAACTGGTAATGTACCTGACTCAATCTTGGCGGCGGGAGGCAATGTTGATCTTTCTTATAACAACCTTACGTGGCAAGGACCTGGGCAATCTGCTTGTCAAGATAACTTGAATTTAAACTTAAACTTGTTCCGGAGTTCTTTGGGGACCACAAAATTACAGGATGTTCTCCCATGTTCAAAGACCTTTAAGTGTCCTAGATACTCAAGCTGTTTGCATGTGAATAGTGGTGGAAAGGATGTAATGATGAAAGAAAATGGTCAAAATATCCTTTATATAGGGGATAGTGTGCCGGGTGGTACTGCTGAATATTATAATGACCTTAAAAAGCTTTGGGGGTTTAGCAGCACTGGTGACTTCATGGATGATGATGACATCCAAAATACACGTTACACCAAGACATTGTCACCTTCAAATTTGTCTGAATTATATGCAACGGCACGAGTGTCCCCTATTTCGCTCACCTATTTCCATTATTGCTTGGAAAATGGGAACTATACAGTAAAGCTCCACTTTGCAGAAATACAGTTTACTAATGATAGGACATGTAACAGTCTTGGGAAACGCTTATTCGATATCTATGTCCAGGATGGACTAGTTTTGAAGGATTTTAACATTGAAGAGAAAGCACATGGTGCTCAAAAACCATATATAGCAACAATTCCTAATGTCAGCGTAACAGACAATATTCTAGAGATCCGACTCTACTATGCTGGCAAGGGAACTGAAAGGGTTCCTTATCCTGCAGCTTATGGTCCCCTCATATCAGCTTTCTCTATTGTTTCTAATTCTAAACCTTGTTCAGTCCAAAAGAAAGCAGTGAATTATATAATAGTTGGAGTTGGATTTGGAATTACAGCTCTTTGCCTAGTCCTTATTATAGTAGGGATTCTTTGGTGGAAACACTTCTTCAAAGGAATAATTAGGACAGAAAAAGGTGTTGATGGACAATATAATCAGACAGGGACATATACATTAGAACAAATTAGAGCTGCCACAAATGATTTCTCTCCTGCTAACAAGATTGGGGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCAGTTATCCGATGGTACTTGGGTAGCGGTCAAACAGCTTTCTTCGAAGTCACGGCAGGGGAATCGTGAATTTTTAAATGAGATAGCCATGATATCTTGTTTGCAACACCCTAATCTTGTGAAACTTCATGGATTTTGCATTGAAAACAATCAACTAATGCTGGTGTATGAGTACATGGAAAATAATAGCCTGGCTCATGCTTTATTCAGCTCAGAGAATCAGCTTAAACTTGATTGGTCAACAAGGCATAGAATCTGTATTGGCATAGCAAAAGGTCTTGCATTTCTTCATGAAGAATCTAGACTCAAGATTGTTCATCGAGATATCAAATCTACTAATGTGTTACTGGATGGGAACTTAAACCCTAAAATATCCGATTTTGGGTTGGCTAGGCTTGATGAAGAGGAAGAGACTCACATCAGCACCAGAGTGGCAGGAACAGTAGGATACATGGCACCGGAATATGCATTATGGGGTCACCTGTCTTACAAGGCTGATGTATACAGTTATGGAATTGTGGTCTTGGAAATTGTCAGTGGAAAGAACAATAAAAGTTACATGCCAAGTGATGATTGTCTTTGTCTTTTAGATAAGGCATTTCATCTTCAATCCACTGAAAACATAATGGCACTGGTTGATGAAAGGCTGGGATTAGAGGTGAACCCAACCGAAGCAGAAAACATGTTGAAAGTAGCTCTGCTGTGTACGAATGTATCGCCGTCTCTTAGGCCTACAATGTCAGAGGTTGTGAACATGCTTGAAGAAAAAACTAGCATCCCAGATGTTGTACCGGAATCTTTTTTTCGTGAAGATTTAAGGTTTAGAGCCATAAGAGACATCTATCAACACGGTGAAAATCAAAGTTTGTCTTCAAGCAAAACAGGCAGTTTAATAGGATATTTTGTACCTACTTCTTCCTCAGTCTCTGGCAATGACATGCATGAAATATGCTCAAAATCATAG 3018 0.393 MEFRIFFALSIIALSCFRWMRFAESKLPQEEVDALGEITTMMGVTHWEFDGDTCQIKKVTLEPPSEAKSSIGCEYHPEKDNFSHVVRIEFKWYNLPGTLPPQMVKLPYLREIDLSLNYLNGTIPKEWASMKLTTIALMANRLSGEIPKELGNITTLVNLDLEANQLSGHVPSQLGNLINLQRLVLSSNNLSGTLPETFALLHNLTEFRISDNSFSGKIPSFIQNWKLLQRLEMHASGLEGPIPSNISLLSNLTILRISDIDGPSQDFPVLSSMKKMRRLVLRNCNITGEIPSDIWKMENLKMLDVSFNQLVGEIPTIKPAAPMTFIFLTGNKLTGNVPDSILAAGGNVDLSYNNLTWQGPGQSACQDNLNLNLNLFRSSLGTTKLQDVLPCSKTFKCPRYSSCLHVNSGGKDVMMKENGQNILYIGDSVPGGTAEYYNDLKKLWGFSSTGDFMDDDDIQNTRYTKTLSPSNLSELYATARVSPISLTYFHYCLENGNYTVKLHFAEIQFTNDRTCNSLGKRLFDIYVQDGLVLKDFNIEEKAHGAQKPYIATIPNVSVTDNILEIRLYYAGKGTERVPYPAAYGPLISAFSIVSNSKPCSVQKKAVNYIIVGVGFGITALCLVLIIVGILWWKHFFKGIIRTEKGVDGQYNQTGTYTLEQIRAATNDFSPANKIGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKLHGFCIENNQLMLVYEYMENNSLAHALFSSENQLKLDWSTRHRICIGIAKGLAFLHEESRLKIVHRDIKSTNVLLDGNLNPKISDFGLARLDEEEETHISTRVAGTVGYMAPEYALWGHLSYKADVYSYGIVVLEIVSGKNNKSYMPSDDCLCLLDKAFHLQSTENIMALVDERLGLEVNPTEAENMLKVALLCTNVSPSLRPTMSEVVNMLEEKTSIPDVVPESFFREDLRFRAIRDIYQHGENQSLSSSKTGSLIGYFVPTSSSVSGNDMHEICSKS 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03856 1005 PANTHER RECEPTOR-LIKE KINASE IN FLOWERS 1-RELATED 65 979 - -
Aip10g03856 1005 SUPERFAMILY L domain-like 79 340 - -
Aip10g03856 1005 SUPERFAMILY Protein kinase-like (PK-like) 653 940 IPR011009 -
Aip10g03856 1005 ProSiteProfiles Protein kinase domain profile. 668 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03856 1005 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 65 979 - -
Aip10g03856 1005 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Aip10g03856 1005 Pfam Protein tyrosine and serine/threonine kinase 672 938 IPR001245 GO:0004672|GO:0006468
Aip10g03856 1005 CDD STKc_IRAK 674 940 - -
Aip10g03856 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Aip10g03856 1005 Gene3D Ribonuclease Inhibitor 262 380 IPR032675 -
Aip10g03856 1005 Pfam Leucine rich repeat 155 213 IPR001611 GO:0005515
Aip10g03856 1005 Gene3D Ribonuclease Inhibitor 196 261 IPR032675 -
Aip10g03856 1005 Gene3D Ribonuclease Inhibitor 39 195 IPR032675 -
Aip10g03856 1005 SMART serkin_6 668 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03856 1005 Gene3D - 401 597 - -
Aip10g03856 1005 Pfam Malectin domain 403 590 IPR021720 -
Aip10g03856 1005 Gene3D Phosphorylase Kinase; domain 1 640 743 - -
Aip10g03856 1005 Gene3D Transferase(Phosphotransferase) domain 1 744 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03856 Aip-Chr10 136306571 136313328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03856 7 833 Receptor kinase-like Gene Family AT1G29750 59.233 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g03856 PK_Tyr_Ser-Thr 6.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03856 - - vra:106779815 1328.92