Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03850 ATGAAGTGGGGTGGAAGAAAATCATCACCAGCTTCTTCTTCTAATAGTATTAATAATAATACTAAGCATTCTTTCATCTCTCAAGTGTCTCCTTTTTCATGGCTGTCCAAGTTCAAGCAGATGAGGATTAACTCGGAGCGAAAGCCGGGGCAGAATGCAAAGCAGAATTCTGTTCCATCTTATGGTTCAGCACCAAAGGATGCATGTGGGAATAGAGGTAGGTTTTATGGAGGGGAAGATGATGCCTTCTGGAGACTCTCATTTGGTGAAGAGAGTCATGAGCATAACAAGAGTAGTGAAGATATCTTGAAATCAACACTGCACAATTTGGATGGTGATCATGCCAATGATGTCATTCAGTCCTCAGCACAATTTGGACCGAGTGATAAAAGACATGGAAGAAGAGATGCTAGTCTGAGGTTCAAGCAGAAGGATATTGGAATGGGAGAGGAAAGAAAGTTGCCAAGTGAGAATGAGTGTGATCATGGAGGAAAGGAATTTGAATTCTTAAGGAGGAGATATGAAAGGAAAGCACAAAAGGTTTTTCAAGATCAACTCTTGAAACTAGAAAAAGCTGCAGATAATCTAGAATCTGAATTTGCATCTAGCAACTCTAAGTCCTTGGAAAATGATGTGCTGAAATCCGAATCGCCTAGAACGATTCGAACACCAAGAACAAATTCGTACATGTCCTCTGTAAATTCAAAGAATTCTGGCCATGGAAATATTAAAGAAGGTGGTGTTAACTCTGGGAAGAATACTGAAGAGTTGAGAGTGAAGGTTAACAAGAAAAGGCAATCACTTCATGTAAGCAAAGAACTTCAGAGGAGGAAGCCAAGGAATAGTCCAAGGGTAAGAGTGCATTCTCCGAGGATGGCTTCCAAGGTCGAAATCTGCAAAATAAAGGCCATAGAAGACATGAAGAAAGCAAAACTAAAGATGAAGAAAGAGGAGGAAATTTCAGAGGAAACGGCAGGCGTAGACAGCTTTGCTGTGGTGAAATGCTCAATGGATCCGCAACAAGACTTCAGAGATTCGATGATGGAGATGATCGTGCAGAGGAAGATCAGCAGGCCAGAAGAAATGGAGGAGCTGTTGGCATGTTATCTCACACTGAATTCTAGTGAGTATCATGATATCATCATCAAGGTTTTCAGGGAGGTGTGGTTATATGTGAACAAGGTTTGTTGTCTTAAATCAGAAGCAATGCAGTTGCAATGA 1221 0.4103 MKWGGRKSSPASSSNSINNNTKHSFISQVSPFSWLSKFKQMRINSERKPGQNAKQNSVPSYGSAPKDACGNRGRFYGGEDDAFWRLSFGEESHEHNKSSEDILKSTLHNLDGDHANDVIQSSAQFGPSDKRHGRRDASLRFKQKDIGMGEERKLPSENECDHGGKEFEFLRRRYERKAQKVFQDQLLKLEKAADNLESEFASSNSKSLENDVLKSESPRTIRTPRTNSYMSSVNSKNSGHGNIKEGGVNSGKNTEELRVKVNKKRQSLHVSKELQRRKPRNSPRVRVHSPRMASKVEICKIKAIEDMKKAKLKMKKEEEISEETAGVDSFAVVKCSMDPQQDFRDSMMEMIVQRKISRPEEMEELLACYLTLNSSEYHDIIIKVFREVWLYVNKVCCLKSEAMQLQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03850 406 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 330 391 IPR006458 -
Aip10g03850 406 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 394 IPR038933 GO:0045892
Aip10g03850 406 MobiDBLite consensus disorder prediction 41 73 - -
Aip10g03850 406 Coils Coil 179 206 - -
Aip10g03850 406 MobiDBLite consensus disorder prediction 256 280 - -
Aip10g03850 406 Pfam Transcriptional repressor, ovate 336 390 IPR006458 -
Aip10g03850 406 ProSiteProfiles OVATE domain profile. 332 391 IPR006458 -
Aip10g03850 406 MobiDBLite consensus disorder prediction 7 22 - -
Aip10g03850 406 MobiDBLite consensus disorder prediction 1 22 - -
Aip10g03850 406 MobiDBLite consensus disorder prediction 201 289 - -
Aip10g03850 406 MobiDBLite consensus disorder prediction 41 62 - -
Aip10g03850 406 MobiDBLite consensus disorder prediction 219 249 - -
Aip10g03850 406 PANTHER TRANSCRIPTION REPRESSOR OFP4 9 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03850 Aip-Chr10 136239233 136240529 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip10g03850 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03850 - - ahf:112792751 721.85