Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03836 ATGGATAGTAAGTTGAGGAACAGGAGTAGTAGGAGTAGCAGAAATCTGTATATGAAGGAACAAGAAGACAATGATGGTGCGGACTCCCCTCCTTCAAATTCCACCCTCTTCAACATTGATGCCTTGGTTACTTCTTCTCCATCATCTTCAAGTAAGAGAAGCAGGCGAGGCGTAGAAAAAAGGGTGGTGCATATAAGAATAAAGGAGGGAGAAGGACCAAGGCTAAAAGGGGAAAACAACACTCCACCACCCTCAGATTCATGGGCATGGAGGAAGTATGGCCAGAAACCCATAAAAGGTTCCCCTTACCCGAGAGGATACTACAGATGTAGCAGCTCAAAGGGGTGTCCGGCGAGAAAGCAGGTAGAGAGAAGCCGAGTGGACCCCACTATGCTGGTAGTTACATATTCATGCGAACACAACCATCCATGGCCTTCTTCACGAAACCACAATAGATCGTCTAATAAGAAGCCCCAGCCCTCCGCCGAGGACCTACTTGTGGACCCGGTCGAACCGGATCTTGAGGGCCACGACTCCATCATTCATGACCTTGGCTGGTTCCGTGACATCTCGGGGGATCCCACCCCGTCTTTGCCCGCCGTACTGGACAGCCCCATATATATTCTCTGGCTACGATGA 639 0.5008 MDSKLRNRSSRSSRNLYMKEQEDNDGADSPPSNSTLFNIDALVTSSPSSSSKRSRRGVEKRVVHIRIKEGEGPRLKGENNTPPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTMLVVTYSCEHNHPWPSSRNHNRSSNKKPQPSAEDLLVDPVEPDLEGHDSIIHDLGWFRDISGDPTPSLPAVLDSPIYILWLR 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03836 212 Pfam WRKY DNA -binding domain 86 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g03836 212 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 164 IPR044810 GO:0003700
Aip10g03836 212 SMART WRKY_cls 84 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g03836 212 SUPERFAMILY WRKY DNA-binding domain 81 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g03836 212 Gene3D WRKY domain 73 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip10g03836 212 MobiDBLite consensus disorder prediction 1 26 - -
Aip10g03836 212 ProSiteProfiles WRKY domain profile. 85 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip10g03836 212 MobiDBLite consensus disorder prediction 27 52 - -
Aip10g03836 212 MobiDBLite consensus disorder prediction 1 92 - -
Aip10g03836 212 MobiDBLite consensus disorder prediction 142 166 - -
Aip10g03836 212 PANTHER WRKY TRANSCRIPTION FACTOR 65-RELATED 13 164 - -
Aip10g03836 212 MobiDBLite consensus disorder prediction 142 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03836 Aip-Chr10 136149816 136150538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03836 20 207 WRKY Transcription Factor Family AT1G29280 49.751 1.38e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip10g03836 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03836 - - ahf:112734976 384.03