Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03830 ATGAAGACTTCTGAGGAATGGAAACCTTTTATGGTAATGATAGCAATTGATTTTTCTTCCACCATAGTGAACATTCTTCTAAAGAAAGTTCTTGAGGAAGGGATGGACCATTTGGTGTTTATCACATACCGTTTGTCAATTTCAACCATTTTCCTAGTCCCTATCAGCTACTTTTGGGAAAGAAACGGAAGACCAAGGCTCACATTTAGAATTTTGTGTTACCTTTTCTTCAGTGCCATTGTTGGGGCATCAGTCACACAGTACTTCTTCCTTCTTGGGATCCAATACACCTCTGCTACCTTTGCTTGTGCCTTTGTCAATATGGTACCTGTGATCACATTCATTATGGCATTGCCATTTGGATTAGAGACTCTGAACATCAAATGTAACAGTGGGAAAGCCAAGATTCTTGGTACACTGGTGTGTGTAGGAGGGGCATTGTTGTTGACACTTTATAAAGGAAAGCCCTTGTTTGATGTTTCTCACTATGAGTCTGCAGCAGCATCAACAGGCGTGAGATCTGCAATGAAGCAACGTTCTTCTCCACCTACTAGAATCATTGAGAAATGGACCATTGGTGTAATAGCTTTGATTCTGGGAACACTGTTTTGGTCTTCATGGTTTATCTTGCAATCAACTATAGGGAAGCTCTATCCATGCCGGTATTCTAGCACAGCCATCATGACTTTGTTTGGAGCCATTCAATCAGCCATCCTTGCTTTGTCCACTGGCAGAGACTTGTCCATGTGGATCCCCAATGGCAGGATACAAATACTCACTGTTCTCTATTCTGGCATGGTTGGGTCAGGGTTGTGCTATGTGGGGATGTCATGGTGTGTTAAAAAGAGGGGTCCTGTGTTTACTGCAGCATTTAGCCCTCTTGTTCAGATAATGTCAGCCATGATTGATATCCCAGTCTTGCATGAGCAGCTCCATCTTGGAAGTGTGTTGGGATCCATGCTGGTAATGGTGGGATTGTATATTCTTCTGTGGGGTAAGAGCAAGGATAATCAGAATCGTGTGACAAATTTAGTAGAAGAAGGTGGAAACAAGGAACAAGTCCCTCCCCCACAAACAACACGACATGTTGCTATAACCTGCGATACACGCTCTAACTGA 1119 0.429 MKTSEEWKPFMVMIAIDFSSTIVNILLKKVLEEGMDHLVFITYRLSISTIFLVPISYFWERNGRPRLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETLNIKCNSGKAKILGTLVCVGGALLLTLYKGKPLFDVSHYESAAASTGVRSAMKQRSSPPTRIIEKWTIGVIALILGTLFWSSWFILQSTIGKLYPCRYSSTAIMTLFGAIQSAILALSTGRDLSMWIPNGRIQILTVLYSGMVGSGLCYVGMSWCVKKRGPVFTAAFSPLVQIMSAMIDIPVLHEQLHLGSVLGSMLVMVGLYILLWGKSKDNQNRVTNLVEEGGNKEQVPPPQTTRHVAITCDTRSN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03830 372 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Aip10g03830 372 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020|GO:0016021
Aip10g03830 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Aip10g03830 372 PANTHER WAT1-RELATED PROTEIN 9 350 - -
Aip10g03830 372 PANTHER WAT1-RELATED PROTEIN 9 350 IPR030184 GO:0016021|GO:0022857
Aip10g03830 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03830 Aip-Chr10 136053681 136055888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03830 4 264 Nodulin-like Gene Family AT3G30340 47.510 3.06e-87 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03830 - - gmx:100791663 546.199