Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03823 ATGTTCTCTCCTCTCCCACCTGCCACGGTAACAACAACACTAGAACTAGAGCTCATGAAGCCCCTCTGCAGATTCTTAATAGTAGCCATGGCGGTGTTTTCTGTGGTGGAATCTTCCAAATCTATATCTTCATGCAACACCGGCAGCAGTAGCGTAGAGCAGAGGCTGGTAGCAAAGGCTTTCAAGTCTGTATCCGGCTTCAACTCTTCCTCCTCCTGGTTCCGAAAAGGAGTATTACTTTCCAACTGTTCATCCCAATCTCATGTCATCAGCATAAACCTTCCATCCAAGAATCTCACCGGAACCATCTCCTGGGGTTATCTCATCAACATCTCAAACCTCCAGCTTCTTGATCTCTCAGGGAATTCCTTACAAGGCCGTGTCCCAACTTGGTTATGGTCAACCTCATCCTTACGTCACCTAAACCTCTCCAACAACAGGTTTGGAGGTAGCGTCGTCTTCACTACCACCGCCGTCATTCAAACGCTCAACCTCTCCCACAACAGGTTCACCAATTGGGTGGTCCAACACCATCCATATCAACGCTACTCTTCCTTCTTCCCAAACCTTAAAATCCTTGACCTCTCTCACAACCACTTAAGGACACCCCTCCCTTCAGGCTTCACCAACCTCACCAACCTTCAATACCTTGACTTATCAAACAACAACCTCACCGGAACTTTCCCTTCCGATTTTCCTCCACTCAACAACCTCCACTTCCTAAACATCTCTTTCAACCGCTTCAACTCAACCGTTAGCCTCAACAAGTTCAACAAATTCGGCAAAGCCGCCTTTATCCACGCTGGCAAGAATTTCACCTACACCGCCACTACTCCAACTCACAGCAACAACCATTCCGCAACTACCACCCCAGCCTCACAAGTCATTCACACAAGATACAAACACAAACACAAACACAAGACACACATTATTATCGCGGTTTCGTGTGCTTCTTCCTTAGCGGTTATTTTTATCATTTGGGCGCTACTACGCATTGCTAGGAAGAAGAAGAAGGAGCGTTGCAAGATTAAGAAATGGGCAATATCGAAAGCGGAGGACATGATGAGCGGCGTGATGGTGGAGAAATCAGGGCCGTTCGAGTTCGAGACTGAGTCAGGGTCCACGTGGGTGGCTGATCTGAAGGAACCATGTTCTGCGGCCGTGGTGATGTTCGAGAAGCCGTTGATGAGCCTGACCTTCAGGGACCTCATCGCTGCCACGTCACACTTCGGGAAGGAGTCACTCCTGGCGGAAGGCAGGTGTGGACCCCTCTACAGGGCTGTACTCCCCGGCGATCTCCACGTGGCAATCAAGGTACTGGAATACGCCAGGGACGTTGATCCTCGTGACTCCATTGCAATGTTCGTTGACCTCTCAAAGCTCAAGCACCCAAATTTGTTGCCCCTCTCTGGTTACTGCATTGCAGGTAAGGAGAAGCTGGTACTGTACGAGTTTATGGCAAACGGCGATTTGGGGAGGTGGCTACACGAGCTTCCAACGGGGGACACCAACGTGGAGGACTGGACACGCGACACGTGGGAGATTCAAAACGGCGTCGTTGAGGGGTCATCAGAGAAAATGGGGTGGCTAACACGTCACCGTATTGCGGTTGGGATAGCGCGTGGACTAGCTTACCTTCACCACGCGGGTTCCAAACCCGTCGTGCACGGCCACCTCGTTACCTCCAACATTCTACTCGCCGACGATTTCGAGCCACGAATATCGGATTTCGGGCTGCGGGGAGAACCGAATCCGAATTGCGGGACGGAGGGTGACGTGTACTGCTTCGGGATGGTGCTGATGGAGATGTTGACAGGGAAGGGAGGGACGGAGGAAACGGTGAGCGCGGTGAGGAAGGCGGTGAGGGAAGGGGAGGGGGTTAGGGTTCTGGAGGAGAGGCTGCTAGTGGGCGGTGAGTGGGAGAGTGAGATGGTGGAGAGCCTCCGAGTGGCGTACCTTTGCACAGCTGAGTCGCCTTCCAAGAGGCCCACTATGAGGCAGGTTTTGGGCTTGCTCAAAGACATTAGTCCAAACCAACCACTCACCCCGAGTTGA 2055 0.5202 MFSPLPPATVTTTLELELMKPLCRFLIVAMAVFSVVESSKSISSCNTGSSSVEQRLVAKAFKSVSGFNSSSSWFRKGVLLSNCSSQSHVISINLPSKNLTGTISWGYLINISNLQLLDLSGNSLQGRVPTWLWSTSSLRHLNLSNNRFGGSVVFTTTAVIQTLNLSHNRFTNWVVQHHPYQRYSSFFPNLKILDLSHNHLRTPLPSGFTNLTNLQYLDLSNNNLTGTFPSDFPPLNNLHFLNISFNRFNSTVSLNKFNKFGKAAFIHAGKNFTYTATTPTHSNNHSATTTPASQVIHTRYKHKHKHKTHIIIAVSCASSLAVIFIIWALLRIARKKKKERCKIKKWAISKAEDMMSGVMVEKSGPFEFETESGSTWVADLKEPCSAAVVMFEKPLMSLTFRDLIAATSHFGKESLLAEGRCGPLYRAVLPGDLHVAIKVLEYARDVDPRDSIAMFVDLSKLKHPNLLPLSGYCIAGKEKLVLYEFMANGDLGRWLHELPTGDTNVEDWTRDTWEIQNGVVEGSSEKMGWLTRHRIAVGIARGLAYLHHAGSKPVVHGHLVTSNILLADDFEPRISDFGLRGEPNPNCGTEGDVYCFGMVLMEMLTGKGGTEETVSAVRKAVREGEGVRVLEERLLVGGEWESEMVESLRVAYLCTAESPSKRPTMRQVLGLLKDISPNQPLTPS 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03823 684 ProSiteProfiles Protein kinase domain profile. 410 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03823 684 SUPERFAMILY Protein kinase-like (PK-like) 400 677 IPR011009 -
Aip10g03823 684 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 226 - -
Aip10g03823 684 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 216 680 - -
Aip10g03823 684 Gene3D Ribonuclease Inhibitor 30 308 IPR032675 -
Aip10g03823 684 Pfam Protein tyrosine and serine/threonine kinase 414 580 IPR001245 GO:0004672|GO:0006468
Aip10g03823 684 SMART LRR_typ_2 187 210 IPR003591 -
Aip10g03823 684 SMART LRR_typ_2 211 234 IPR003591 -
Aip10g03823 684 SMART LRR_typ_2 111 135 IPR003591 -
Aip10g03823 684 ProSiteProfiles Leucine-rich repeat profile. 213 234 IPR001611 GO:0005515
Aip10g03823 684 Pfam Leucine rich repeat 188 248 IPR001611 GO:0005515
Aip10g03823 684 Pfam Leucine rich repeat 97 148 IPR001611 GO:0005515
Aip10g03823 684 Gene3D Phosphorylase Kinase; domain 1 370 485 - -
Aip10g03823 684 PANTHER KINASE, PUTATIVE-RELATED 21 226 - -
Aip10g03823 684 PANTHER KINASE, PUTATIVE-RELATED 216 680 - -
Aip10g03823 684 Gene3D Transferase(Phosphotransferase) domain 1 486 583 - -
Aip10g03823 684 Gene3D Transferase(Phosphotransferase) domain 1 584 681 - -
Aip10g03823 684 SUPERFAMILY RNI-like 79 252 - -
Aip10g03823 684 PRINTS Leucine-rich repeat signature 114 127 - -
Aip10g03823 684 PRINTS Leucine-rich repeat signature 211 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03823 Aip-Chr10 135996095 135998592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03823 89 675 Receptor kinase-like Gene Family AT5G07280 30.093 9.18e-73 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Aip10g03823 PK_Tyr_Ser-Thr 2.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03823 - - gmx:100788556 798.119