Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03820 ATGGAAAGTAAATGGGGCCCCTTTGGGTTATGCCTTTGGAGTTACATTCTATTGATTTCTGCGTGTGGAATTCAGCAGTCTTGCTCTCTGAATGATGAAGAAACAGGATTGGCTCTACTGAAATTTCGGCTGACTGATCCTTACGGCGCTCTAGCAAATTGGAATTCAAATGATTATGATGCCTGCAAGTGGTCAGGTGCCCATTGTGTTGATGGTAAAGTGAACATGCTGTTGGCTTGTGGCAATACAATTGAAGTCGTTGAGCATTATTCATCTCTGAAAACTTCACCTCACCTCAGAAATAGAAAGTTGGCACAATGGTTCAAGTCAGAGAAGGCCTCCTCTCATGGAATCAGAGGGAATAACTGTGACAATTTGCCCGGTTCTGATGGGATAGAGACTGCTCCAAGTACATCAAATCTAGTCAATACTGCACGCCGACGGTTGCTTGATGAGTCCAGCAGTAACCTTGCCGCTGCACCTTTTGCCGGGGCGCCTGTACCGATTAGTTCCGTTCCAACTACCCTGAGTAGTGGATCTTTCCCAGCTGTACCAGTTTCCAAACAAACTGATTCACCCAACTCACCACCTTCAAGTTCTAATTCTCCTCCAAACGATAGTCCTTCTTCAAATGAAAATGGTTCAAGCCCGTGGAAGATTGTTGTTATTGTTATATGTGTGCTTCTCTTGGTCATTATTATTTTGGTCCTTCTTTGGATTTGGAGAAAACGAGCTGTAAAAGTAATAAAGCCCTGGAGGACAGGAATAAGTGGACAGTTGCAGAAAGCATTTGTAACAGGTGTCCCAAAATTGAACCGAGCGGAGCTGGAGACAGCTTGTGAAGATTTCAGCAATATCATTTATGATTTAGGTTCATGCACCATATACAAAGGAACTCTGTCCAGTGGCGTTGAGATTGCTGTTGCTTCTACTACTATTACTTCTTCAGCACATTGGACAAAGAGCATGGAGATGGCATATCGAAAAAAGCTTGATATTTTGTCCCGTATTAACCACAAGAACTTCACCAATCTAATTGGTTACTGTGATGAAGAACAACCCTTCACAAGGATGATGGTGTTTGAGTATGCTCCAAGTGGAACCCTATATGATCACCTGAATGTTCCTGAAGTTGAACACCTTGATTGGAGTGCAAGGATGAGGGTTATTATGGGCACTGCTTATTGTCTTCAGTACATGCACCATGATCTCAATCCACCAATAGCTCATTCCGAGCTGAGTTCAGATGCTATTTTATTAACTGATGACTTTGCAGCTAAGATTGCAGAGGTAGTTTTTTGCAAGAATGTAGTATCGCCAACCAAAACAACTGAAGGCGAATCAAAGCAATTCGAGTTGCCGCCTGAGTGCTGTCCTGAAAACGATGTCTATAGATTTGGAGTTTTATTGCTTGAAATCATTACTGGGAAGCTACCATACCAGGACCATGGCAACCTTACTGTCCTTGCAGACTGGTCTGCTAAGTACTTGCGTGAGAAGACAAGCGACCGCTCTATTGTTGATCCGACGCTGCAATCATTCAAAGATGAAGAACTGAGTGTGATATTTGATGTGATCCATGAATGCACTCAATCAGATGCAAGTGTAAGACCAACAATGAAGGATGTAACTCTCAAGCTGAGGGATGCGCTTAAAATATCGCCCGACCAAGCCGTCCCAAGACTTTCTCCACTCTGGTGGGCTGAACTCGAGATCTTGTCAATGGAGGGCACTTAA 1737 0.4347 MESKWGPFGLCLWSYILLISACGIQQSCSLNDEETGLALLKFRLTDPYGALANWNSNDYDACKWSGAHCVDGKVNMLLACGNTIEVVEHYSSLKTSPHLRNRKLAQWFKSEKASSHGIRGNNCDNLPGSDGIETAPSTSNLVNTARRRLLDESSSNLAAAPFAGAPVPISSVPTTLSSGSFPAVPVSKQTDSPNSPPSSSNSPPNDSPSSNENGSSPWKIVVIVICVLLLVIIILVLLWIWRKRAVKVIKPWRTGISGQLQKAFVTGVPKLNRAELETACEDFSNIIYDLGSCTIYKGTLSSGVEIAVASTTITSSAHWTKSMEMAYRKKLDILSRINHKNFTNLIGYCDEEQPFTRMMVFEYAPSGTLYDHLNVPEVEHLDWSARMRVIMGTAYCLQYMHHDLNPPIAHSELSSDAILLTDDFAAKIAEVVFCKNVVSPTKTTEGESKQFELPPECCPENDVYRFGVLLLEIITGKLPYQDHGNLTVLADWSAKYLREKTSDRSIVDPTLQSFKDEELSVIFDVIHECTQSDASVRPTMKDVTLKLRDALKISPDQAVPRLSPLWWAELEILSMEGT 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03820 578 Gene3D Transferase(Phosphotransferase) domain 1 365 559 - -
Aip10g03820 578 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Aip10g03820 578 MobiDBLite consensus disorder prediction 180 196 - -
Aip10g03820 578 PANTHER PROTEIN MALE DISCOVERER 2 105 578 - -
Aip10g03820 578 PANTHER PROTEIN MALE DISCOVERER 2 1 85 - -
Aip10g03820 578 PANTHER LRR RECEPTOR-LIKE KINASE 1 85 - -
Aip10g03820 578 PANTHER LRR RECEPTOR-LIKE KINASE 105 578 - -
Aip10g03820 578 ProSiteProfiles Protein kinase domain profile. 170 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03820 578 Pfam Protein tyrosine and serine/threonine kinase 294 546 IPR001245 GO:0004672|GO:0006468
Aip10g03820 578 Gene3D Phosphorylase Kinase; domain 1 257 363 - -
Aip10g03820 578 SUPERFAMILY Protein kinase-like (PK-like) 268 544 IPR011009 -
Aip10g03820 578 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Aip10g03820 578 MobiDBLite consensus disorder prediction 180 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03820 Aip-Chr10 135960243 135964849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03820 275 560 Receptor kinase-like Gene Family AT5G65700 29.373 1.53e-36 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aip10g03820 PK_Tyr_Ser-Thr 8.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03820 - - adu:107482237 1083.55