Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03819 ATGTCAGAGGGATTTGAGATTCATCAAGAGAATAATGAAGGAAGTGGCGGGAAGAGTAGTAATGATAATGAGGGTGAGGAAAATTCATTTGACTTGAATGAAGGAGCGGGTATGAGTGATGATGAGGAATTGGAAGAAGAGAATAATAATAATGAAGCAAAGGAGGATGAAGAAACAAACCCAAGTAGCAGCAGCACAGCATCAAGAGAAGGGAAGAGAGGGAGTGGTGTGAGACAATATGTGAGATCAAAGATGCCAAGGCTTCGTTGGACTCCTGATCTTCATCTCTCCTTTGTCCATGCTGTTCAGAGGCTTGGAGGTCAAGAAAGAGCAACACCTAAATTGGTGCTTCAGTTAATGAATGTCAGAGGCCTAAGCATTGCTCATGTCAAGAGTCACTTGCAGTTCCTTAAGCAAATGGAAAATGTTGCAGTAGTAAGAAGTGAAAGACAGAGAAGCAAGCATGAAGTAGGTGGTGTGGCGTATGAGACGATGATGAAGAGGAGTAGTCCTCATCAACATTTCAAGATGGGAAACGGTGGAATTTTTCTTACTACTAACTACACCACCACTACTCCATTCTCCTCCCTCCCACATTCAAAGCCCACAAACCACCACCTATGGCACTTGAATCATCAAATACCTTCTATTAGAAGACCAATAACACCACCGTTGCAAACTCAACTAGCCAGCAGAATTACGCCCATGAGACCAAGCCGATTTCTTGAAGAGAAAAAGTGGCCTCCTTTTCATCACTGGAAATTCAAAAGGCTTCCTAATACCAACACCATTACACTACCCTCATCACAATCCTCTCCATTTGCCACCACCTCTGACTTCATCACCTTTGGAGACAACACCACCACCACAATCAGAGACTATCTATCAAACTCCAATACTTTCAAGGTACCATTATTAAATTTCGTGACGAggaatTTGAATCATCAAGACAAGCAGTTGCAGCACAAAGAGAAGCAATGGGTTCCAGATTTGCAACTGGGTTTGAGTCATCACAAAGATGGAGACAATAATGATGGCACAGGAACCCCAGAAATTAGCACTAAACTTTCACTTTCATAG 1080 0.4231 MSEGFEIHQENNEGSGGKSSNDNEGEENSFDLNEGAGMSDDEELEEENNNNEAKEDEETNPSSSSTASREGKRGSGVRQYVRSKMPRLRWTPDLHLSFVHAVQRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQFLKQMENVAVVRSERQRSKHEVGGVAYETMMKRSSPHQHFKMGNGGIFLTTNYTTTTPFSSLPHSKPTNHHLWHLNHQIPSIRRPITPPLQTQLASRITPMRPSRFLEEKKWPPFHHWKFKRLPNTNTITLPSSQSSPFATTSDFITFGDNTTTTIRDYLSNSNTFKVPLLNFVTRNLNHQDKQLQHKEKQWVPDLQLGLSHHKDGDNNDGTGTPEISTKLSLS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03819 359 MobiDBLite consensus disorder prediction 334 359 - -
Aip10g03819 359 SUPERFAMILY Homeodomain-like 84 136 IPR009057 -
Aip10g03819 359 MobiDBLite consensus disorder prediction 1 84 - -
Aip10g03819 359 MobiDBLite consensus disorder prediction 36 53 - -
Aip10g03819 359 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 359 IPR044848 GO:0003700
Aip10g03819 359 Gene3D - 85 141 - -
Aip10g03819 359 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 86 137 IPR006447 GO:0003677
Aip10g03819 359 Pfam Myb-like DNA-binding domain 88 136 IPR001005 -
Aip10g03819 359 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 359 - -
Aip10g03819 359 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03819 Aip-Chr10 135942813 135944979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03819 77 138 G2-like Transcription Factor Family AT2G42660 80.645 8.20e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip10g03819 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03819 - - adu:107482239 623.624