Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03811 ATGGCGTCGTCCACCAAGGAACGTGAAAACTTCGTCTACACCGCCAAACTCGCTGAACAAGCCGAGCGCTATGAAGAAATGGTGGATGCAATGAAGAATGTAGCGAAGCTAAACGTGGAGTTGACGGTTGAGGAGCGAAACCTTCTGTCAGTCGGGTACAAGAATGTAGTTGGGGCTCGCAGGGCTTCATGGAGGATTCTCTCCTCCATTGAGCAGAAGGAAGAATCCAAAGGGAACGATGTTAGCGTTAAGCGAATCAAGGAGTATAGGAACAAAGTTGAATCTGAGTTGTCTAACATCTGTACTGATATCATGACTGTTATTGATGAACACCTTATCCCTTCTTGTTCTGGTGGTGAACCTAGTGTATTCTTCTATAAGATGAAGGGCGACTATTATCGGTATCTGGCTGAATTCAAGTCTGGAGATGAGAGAAAGGAGGCTGCTGATCAGTCCATGAAAGCATATCAGGCGGCTTCTACTACTGCCGAAGCTGAGTTACCTCCAACGCATCCCATTAGATTGGGTTTGGCTTTGAACTTCTCTGTTTTCTATTATGAAATTTTGAACTCTCCTGAAAGGGCCTGTCACCTTGCTAAGCAGGCATTTGATGTAGCAATTGCTGAGTTGGATACTCTAAGCGAAGAGTCTTACAAAGACAGCACACTAATTATGCAGCTTCTGAGGGACAACCTTACCTTGTGGACCTCTGACATCCCTGAAGATGGAGCCGATGAACAAAAGGTAGAGTCCGCACAAGCTACCCAAGGGGAAGACTGA 780 0.459 MASSTKERENFVYTAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEESKGNDVSVKRIKEYRNKVESELSNICTDIMTVIDEHLIPSCSGGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADQSMKAYQAASTTAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDVAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGADEQKVESAQATQGED 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03811 259 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Aip10g03811 259 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Aip10g03811 259 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Aip10g03811 259 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Aip10g03811 259 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Aip10g03811 259 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Aip10g03811 259 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 5 247 - -
Aip10g03811 259 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Aip10g03811 259 PIRSF 14-3-3 2 249 IPR000308 -
Aip10g03811 259 Gene3D - 1 251 IPR036815 -
Aip10g03811 259 Coils Coil 14 34 - -
Aip10g03811 259 Pfam 14-3-3 protein 15 236 IPR023410 -
Aip10g03811 259 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Aip10g03811 259 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Aip10g03811 259 PANTHER 14-3-3 PROTEIN 5 247 IPR000308 -
Aip10g03811 259 MobiDBLite consensus disorder prediction 239 259 - -
Aip10g03811 259 SMART 1433_4 8 249 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03811 Aip-Chr10 135850368 135853241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03811 3 257 14-3-3 family AT2G42590 79.608 4.69e-153 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03811 K06630 - gmx:100807980 472.241