Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03806 ATGGATGGACCTTCCATCAGGTTCCCCTTCAGGCTGAAAGGAACACAACCAGAATGTTGTAGCCATGATTCTTCCTTTGATCTTTCTTGCACTGATACCACCAACACAATGCTGCAGCTCCCATTCTCTTTCAAGGCCTTAGTCAAAAGCATCAACTATTCATCACAACTCATAACTCTCTCTTATCCTCAAGGCTGCTCCATTCACTCACACATTCCACTGTTTGACTTTTCTCTTTCTCCTTTTAGCTTCATTGATGGCTCTCTACTCCATAATTATGCATTGTTCAATTGTTCGAGGATGGATAAGGAATACTTCTTAGCATCTAGAAGCTTTTCTTGCCTTCATGTACTTTTCAAGTTGAACATTGATACTGTTCTTAATTGGTTCCAACCGGATTGCAAAGACTGCGAAAGTTTACATAGAGGGAAAAAGCTTGCTGGTGAAATTCTAGGCCCTTTTATGTTTCTATTTGTTGGAGTGGCAGCTTATTGTGTCTATGTAGCTGGCAATGAAAGGCTGAGTTATATGAAGATCAAAAAGCTTTTGGAGGACTACAAAGCACTTAAGCCTGCAAGGTACTCTTATGCAGATATAAGAAGAATTACAAATCAGTTTAGCGAAGAATTGGGGCAAGGAGCATATGAACCTGTCTTCAAAGGGAAGCTAGGGGATGAAATTGAGGTTGCTGTAAAGGTCTTAAATGCTTCATCAGCAGACACCAAAGATGCCTTTCTAGGCTGGGAAAAGCTACAAGATATTGCTCTTGGCATAGCCAAGGGAATTGACAAAGCTCTGCCCAAGGATCAAAGTATAGTGTCAATGACCACAGCTAGGGGTACTTTGGGCTACATTGCACCAGAGGTATTTTCTAGGAACTTTGGCAATGTATCGTGTAAATCGGATGTATATAGTTATGGAATGCTGCTGCTTGAGATGGTTGGTGGAAGAAAAATCACTGATGTCACAGAAGAAAATAGCAGCCATGTTTATTACCCTCAATGGATTTACAATCTTCTAGATAACAAAGAAGACATTAAAATCCATATGGAAGGAAAAGAAGACACTAGAGTTGCAAAGAAGCTATCAGTTGTAGGACTTTGGTGCATTCAGTGGCACCAGGCGAATCGTCCAACCATGAAAGATGTGGTTCAAATGCTGGAAAGAAATGGGGAGGGGTTAGAGATGCCTCCTAATCCTTTTGCCTCTACTACTACAATCAAAACAAGGGCTAGATTATGTAATGGAAGCCTGAACCAAGAACTAGATGTTATCTCAGAAATAGAGTGA 1290 0.407 MDGPSIRFPFRLKGTQPECCSHDSSFDLSCTDTTNTMLQLPFSFKALVKSINYSSQLITLSYPQGCSIHSHIPLFDFSLSPFSFIDGSLLHNYALFNCSRMDKEYFLASRSFSCLHVLFKLNIDTVLNWFQPDCKDCESLHRGKKLAGEILGPFMFLFVGVAAYCVYVAGNERLSYMKIKKLLEDYKALKPARYSYADIRRITNQFSEELGQGAYEPVFKGKLGDEIEVAVKVLNASSADTKDAFLGWEKLQDIALGIAKGIDKALPKDQSIVSMTTARGTLGYIAPEVFSRNFGNVSCKSDVYSYGMLLLEMVGGRKITDVTEENSSHVYYPQWIYNLLDNKEDIKIHMEGKEDTRVAKKLSVVGLWCIQWHQANRPTMKDVVQMLERNGEGLEMPPNPFASTTTIKTRARLCNGSLNQELDVISEIE 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03806 429 Gene3D Transferase(Phosphotransferase) domain 1 251 399 - -
Aip10g03806 429 PANTHER RUST RESISTANCE KINASE LR10-RELATED 142 238 IPR045874 GO:0004672
Aip10g03806 429 PANTHER RECEPTOR-LIKE KINASE 142 238 - -
Aip10g03806 429 SUPERFAMILY Protein kinase-like (PK-like) 193 404 IPR011009 -
Aip10g03806 429 SMART tyrkin_6 204 387 IPR020635 GO:0004713|GO:0006468
Aip10g03806 429 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 117 IPR045874 GO:0004672
Aip10g03806 429 PANTHER RUST RESISTANCE KINASE LR10-RELATED 267 428 IPR045874 GO:0004672
Aip10g03806 429 PANTHER RECEPTOR-LIKE KINASE 2 117 - -
Aip10g03806 429 Gene3D Phosphorylase Kinase; domain 1 177 250 - -
Aip10g03806 429 PANTHER RECEPTOR-LIKE KINASE 267 428 - -
Aip10g03806 429 Pfam Wall-associated receptor kinase galacturonan-binding 4 60 IPR025287 GO:0030247
Aip10g03806 429 PANTHER RUST RESISTANCE KINASE LR10-RELATED 240 263 IPR045874 GO:0004672
Aip10g03806 429 PANTHER RECEPTOR-LIKE KINASE 240 263 - -
Aip10g03806 429 Pfam Protein kinase domain 264 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03806 Aip-Chr10 135822734 135824637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03806 193 401 Receptor kinase-like Gene Family AT5G38280 33.333 5.51e-46 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip10g03806 Pkinase 1.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03806 - - mtr:MTR_4g073230 494.582