Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03787 ATGTTTCCGAAGGAGAATAGTAGTAACGGCTACCATAACCCGCCGCCGCCGCCGCCGGGAGTGGGTAACATTAACAGCCACAGAGAGCGAGCCCGTCGAGGCACGCGCAGGTCACGTGCTTCCCGAGACAGTATCAGCCTTAGGGTTTATGACCAGCAGCAGCAGCAGCAGCAGCGAGCTCCTTGCACGGACTTCGACATGGCCTATTTCCATTCTTACGCTCACCTCGGTATTCACGAAGAGATGATAAAGGATCGCGTGAGGACTGAAACTTATAGAGAAGCAATCATGCGGCATCAGAGTTTTATTGCAGGCAAAGTTGTAGTTGACGTGGGATGTGGTACAGGAATCCTTGCAATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTATATGCAGTTGATGCCAGTGACATTGCCCTGCAGGCAAATGAAGTTGTGAAAGCAAATAATCTGTCTGATGTTATTGTTGTATTGCATGGAAGGGTTGAGGATGTTGAAATCAATGAACAGGTGGATGTTATTATTTCAGAATGGATGGGTTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTCATTACTGCTAGAGATCGCTGGCTCAAACCTGGGGGTCTTATCCTTCCTTCAAATGCAACGTTGTACATGGCTCCTGTCACACATTGTGACAGATACAGTGGAAGCATTGATTTCTGGCGCAATGTTTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAGTGTGCATTTGAAGAACCTTCTGTGGAGACAATTACCGGTGAAAATATTTTGACATGGCCACATGTGGTGAAATATATTGATTGTTATTCTGTTACCATTGGTGAGCTAGAAACTGTAACAACAAGATTTAAGTTCAATTCAATGATGCGAGCACCACTTCATGGTTTTGCATTTTGGTTTGATGTTGAATTTAATGGGCCTGCAATGCCACAAAGCAATTATCCTTCATCAACTTCATTTACTGATAATCATCTGGTGAATGGTAGTCAGAGGAAAAAGCGGATAAATCCAAATGAAGCATTGGTCCTATCCACTGCACCTGAGGACCCTCCAACACATTGGCAGCAGACGTTGATATACTTTTATGATCCGATAGAATTGGAACAAGATCAAGTAATTGAAGGTCTAGTGACATTGACACAAAGCAAAGAGAATGCTCGCTTTATGAATATTCACCTTGAGTATACTTCGGGAGGTCGATCACACATCAAAGAGTCTGTAATGAGATGA 1254 0.4362 MFPKENSSNGYHNPPPPPPGVGNINSHRERARRGTRRSRASRDSISLRVYDQQQQQQQRAPCTDFDMAYFHSYAHLGIHEEMIKDRVRTETYREAIMRHQSFIAGKVVVDVGCGTGILAIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVIVVLHGRVEDVEINEQVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSNATLYMAPVTHCDRYSGSIDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENILTWPHVVKYIDCYSVTIGELETVTTRFKFNSMMRAPLHGFAFWFDVEFNGPAMPQSNYPSSTSFTDNHLVNGSQRKKRINPNEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQVIEGLVTLTQSKENARFMNIHLEYTSGGRSHIKESVMR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03787 417 Gene3D Vaccinia Virus protein VP39 63 208 IPR029063 -
Aip10g03787 417 CDD AdoMet_MTases 108 207 - -
Aip10g03787 417 MobiDBLite consensus disorder prediction 45 59 - -
Aip10g03787 417 PANTHER BNAC03G41340D PROTEIN 20 414 - -
Aip10g03787 417 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 66 417 IPR025799 GO:0016274|GO:0018216
Aip10g03787 417 MobiDBLite consensus disorder prediction 1 59 - -
Aip10g03787 417 Gene3D - 210 416 - -
Aip10g03787 417 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 72 407 IPR029063 -
Aip10g03787 417 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 20 414 IPR025799 GO:0016274|GO:0018216
Aip10g03787 417 Pfam Ribosomal protein L11 methyltransferase (PrmA) 104 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03787 Aip-Chr10 135612621 135624913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03787 69 417 C2H2 Transcription Factor Family AT3G12270 37.363 4.61e-67 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03787 K11437 - gmx:100809174 693.345