Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03764 atggttccatgtaggtccgtgcctggTCGGATCACTCCTGCAATCATAAATGCAGCCATTGATCTGAATCTGTTTGAGATCATACCATCAAAAGGGATCATGTCTGCCTCGGAAATTGCTTCAAAGCTTCCGATTAAAAAAGAAGACACTGATATGGTGGCAAAGAGGCTGGAGCGCATGCTGCCTTCACTGGCAAGCCACTCGCTTCTAGAATGCTCTATTCGCATTAACCAAGATGGCACCAAAGAAAGAGTTTATGCTCTCTCAAATGTTGGTGCCTACTTCAGATCCTCTCGTCATGAACATGAATATGGCGGCTCCTTGACTCCTCTCTCTGTTCTCTTCCATCGAGTATATGATGACCTTTGGAAGGACGCAAAAGATGCAATTTTGGACCCAAATAACAATCATTTTGAAAGGGTTTATGGAATGCCAATGTTCGAATATTTGAAGACAAACAAAGAAATTAGCCATGTTTTTGACCAAACAATGGCCCAATCTGGCCCACTGGGAATGAAAAGGATCATAAGCCTATACAAAGGTTTTGAGGGAGTGACAACATTGGTTGATGTAGGAGGTGGAATAGGACAAACCTTAAACTTGATCATTTCTGCGTTTCCTTCCATTAAAGGAATTAATTTTGATATGCCTCATGTTGTGAAAAACGCACCATCATATCTAGGGATTGAGCACGTTGGAGGAGACATGTTCGAAAGTGTTCCAAAGGGTGATGCCATTATGCTAAAGCATGTATGTCATAATTGGTCAGATGAAGAATGCGTCAAATTCCTAAGAAACTGCCACGAAGCGTTGCCACAACATGGAAAGGTGATTGTTTTGGACTTCATAATGCCAGAAATCCCGAATTCAAGCAATTCATCAAAACATATTTGTGATGTGGACTACCTCATGTTTATAATTAATGGCGGAAAGGAACGAACCCAGAAAGAATTTGAGAGGCTATGCATCAACTCTGGATTTTCTAGATTCCAAGTTGCTTGCACTACTTCCTTAACTACGTTTGCAGTCATAGAATTTTACAAATAA 1047 0.3954 MVPCRSVPGRITPAIINAAIDLNLFEIIPSKGIMSASEIASKLPIKKEDTDMVAKRLERMLPSLASHSLLECSIRINQDGTKERVYALSNVGAYFRSSRHEHEYGGSLTPLSVLFHRVYDDLWKDAKDAILDPNNNHFERVYGMPMFEYLKTNKEISHVFDQTMAQSGPLGMKRIISLYKGFEGVTTLVDVGGGIGQTLNLIISAFPSIKGINFDMPHVVKNAPSYLGIEHVGGDMFESVPKGDAIMLKHVCHNWSDEECVKFLRNCHEALPQHGKVIVLDFIMPEIPNSSNSSKHICDVDYLMFIINGGKERTQKEFERLCINSGFSRFQVACTTSLTTFAVIEFYK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03764 348 Gene3D - 11 175 IPR036388 -
Aip10g03764 348 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 4 348 IPR016461 GO:0008168
Aip10g03764 348 Gene3D Vaccinia Virus protein VP39 157 335 IPR029063 -
Aip10g03764 348 PANTHER O-METHYLTRANSFERASE 9 348 IPR016461 GO:0008168
Aip10g03764 348 PIRSF O-mtase 4 348 IPR016461 GO:0008168
Aip10g03764 348 CDD AdoMet_MTases 187 284 - -
Aip10g03764 348 Pfam Dimerisation domain 16 64 IPR012967 GO:0046983
Aip10g03764 348 Pfam O-methyltransferase domain 123 328 IPR001077 GO:0008171
Aip10g03764 348 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 9 348 - -
Aip10g03764 348 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 339 IPR029063 -
Aip10g03764 348 SUPERFAMILY "Winged helix" DNA-binding domain 9 98 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03764 Aip-Chr10 135388225 135390684 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03764 11 334 Monolignol Biosynthesis Gene Families AT5G54160 49.085 3.50e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03764 K13066 - aip:107621172 688.337