Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03760 ATGAGTTCCAGCAATAATAATTCCCAGAAGGAGGTTTACCATGATGATTTCACTAAAGCAGCTTCATTAGCATTTGCTCAAGTGTTTTCTTCAATCTTGGAGGCTGCTATTGATATGAACTTGTTTGATATCATATCAAAGGCAGAGAGTTCGTTAGGCATGTCTGCTTCTGAGATTGCATCTAAGATTCCAAAGCAACACAGTGAGATGGGTAGCAGACTTGAACGCATGCTGCCATCTTTGGTGGCTCGTTCTCTTCTCTCTTGCTCCATTCGCACCATTAATGAAGACGGTGACACTGAGAGGGTTTATGCAGTTTCCCCTGTTGGACAATACTTCAGACCTAGTCATGATCAATCGGAAAACTCCTTGGCTGCAATGTCAACTTTATTCTATCGAGGATATCGTCATGTTTGGAAAGATACGAAAGATGCAATATTGGATGCTAACAATCACAACCATTTCCAAAGAATGTATGGAAAGATGGCATTTGAATATATGGAAACAGACAGAGAGTTATGTAACCTTTTCGGAGAAGCAATGTCTCAAGTAGGGCCTTTAGGAGTGAAATCAATCCTTGATGCATATAAAGGTGGCTTTGATGGAATATCAACGTTAGTTGATGTAGGAGGTGGATATGGACAAGTCCTCAAACAAATTCTCTTCCAATATCCATCAATTCAAAAAGCAATTAATTTTGATTTGCCTCATGTTGTGAAAAACGCACCCCCTCATCCAGGGATAGAGCATATCGGGGGAGACATGTTTGAAAGTGTTCCAAAAGGTGATGCCATTTTGATCAAGCATGTATGTCATAACTGGGGAGATGAAGAATGTGTGAAGTTTTTGAGAAAGTGCCACGAAGCTTTGCCAGCGGATGGGAAGGTTATAGTTTTGGAAATTTTGGTGCCAGAAATTCCCAAGTCGACATCAAAGGATATTTGTGCTGTGGACATGGATTACAGTATGTTTCTAGTTCATGGTGGAAAGGAAAGAACCGAGAAACAATATGAGAAATTATGCAAGAGGTCAGGATTTTCCAGATTTAAGGTTGCTTGCAATGATTCAAGTGCCATTGATGCAGTGATGGAGTTTTACAAATAA 1104 0.4004 MSSSNNNSQKEVYHDDFTKAASLAFAQVFSSILEAAIDMNLFDIISKAESSLGMSASEIASKIPKQHSEMGSRLERMLPSLVARSLLSCSIRTINEDGDTERVYAVSPVGQYFRPSHDQSENSLAAMSTLFYRGYRHVWKDTKDAILDANNHNHFQRMYGKMAFEYMETDRELCNLFGEAMSQVGPLGVKSILDAYKGGFDGISTLVDVGGGYGQVLKQILFQYPSIQKAINFDLPHVVKNAPPHPGIEHIGGDMFESVPKGDAILIKHVCHNWGDEECVKFLRKCHEALPADGKVIVLEILVPEIPKSTSKDICAVDMDYSMFLVHGGKERTEKQYEKLCKRSGFSRFKVACNDSSAIDAVMEFYK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03760 367 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 14 367 - -
Aip10g03760 367 Gene3D - 28 192 IPR036388 -
Aip10g03760 367 Pfam Dimerisation domain 32 81 IPR012967 GO:0046983
Aip10g03760 367 Gene3D Vaccinia Virus protein VP39 174 354 IPR029063 -
Aip10g03760 367 PANTHER O-METHYLTRANSFERASE 14 367 IPR016461 GO:0008168
Aip10g03760 367 CDD AdoMet_MTases 205 298 - -
Aip10g03760 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 367 IPR016461 GO:0008168
Aip10g03760 367 Pfam O-methyltransferase domain 139 347 IPR001077 GO:0008171
Aip10g03760 367 SUPERFAMILY "Winged helix" DNA-binding domain 15 117 IPR036390 -
Aip10g03760 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 354 IPR029063 -
Aip10g03760 367 PIRSF O-mtase 1 367 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03760 Aip-Chr10 135345317 135346999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03760 20 354 Monolignol Biosynthesis Gene Families AT5G54160 46.471 1.17e-95 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03760 - - gmx:100779492 417.927