Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03755 ATGGATCGACCTGGAGGTGGTGCAGTGAATGTTGGTGTTGGAATGGATATGGCGATCATGCACGAGAGTGAAAGGTATGAACTTGTTCGTGATATTGGCTCTGGCAATTTTGGGGTGGCAAGGCTTATGAGAGATAAGCACACTAATGAGCTTGTTGCTGTCAAATATATTGAGAGAGGTGATAAGATAGATGAAAATGTGAGAAGGGAGATTATAAATCACAGATCGCTGAGGCATCCAAATATTGTTAGATTCAAAGAGGTCATATTAACCCCTACACATTTGGCTATTGTGATGGAATATGCTGCTGGTGGAGAGCTATTTGAGCGAATATGCAATGCAGGACGGTTTAATGAGGATGAGGCGCGCTTCTTCTTCCAACAACTTATCTCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGCCATCGTGACTTGAAGTTAGAGAACACATTACTAGATGGCAGTCCAGCTCCGCGATTAAAGATATGTGATTTTGGGTATTCTAAGTCCTCAGTGCTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATACATTGCTCCGGAAGTTCTACTCAGGAAGGAATATGATGGCAAGATTGCGGATGTGTGGTCTTGTGGTGTGACCTTATATGTCATGTTGGTGGGCTCATACCCTTTTGAGGATCCAGATGAACCAAAAAATTTCCAGAAGACAATTCATAGAATTTTGAAAGTCCAGTACTCAATTCCTGACAGTATTAGCATATCACCTGAATGCCGTCATCTGATCTCAAGGATCTTTGTCGCTGACCCTGCCCAGAGAATAAACATTCCTGAGATTAGAAACCATCCGTGGTTCTTGAAGAACCTCCCAGCTGATCTCATGGTTGACTATACAAACACCCAGTTTGAGGAGCCTGAACAACCAATGCAGAGCATTGAAGAAATCATGCAGTTAATTGCTGAGGCTACAATTCCTGCAGCCGGAACTCGGTCTCTGAACCGTTATCTTAACGGCAGCTTGGATATTGACGACATGGACGAAGACTTAGAGCTCGATGATCCCGACCTTGATATCGATAGCAGTGGAGAAATAGTTTATGCAATGTAA 1098 0.4326 MDRPGGGAVNVGVGMDMAIMHESERYELVRDIGSGNFGVARLMRDKHTNELVAVKYIERGDKIDENVRREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAAGGELFERICNAGRFNEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRKEYDGKIADVWSCGVTLYVMLVGSYPFEDPDEPKNFQKTIHRILKVQYSIPDSISISPECRHLISRIFVADPAQRINIPEIRNHPWFLKNLPADLMVDYTNTQFEEPEQPMQSIEEIMQLIAEATIPAAGTRSLNRYLNGSLDIDDMDEDLELDDPDLDIDSSGEIVYAM 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03755 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Aip10g03755 365 SUPERFAMILY Protein kinase-like (PK-like) 20 311 IPR011009 -
Aip10g03755 365 Pfam Protein kinase domain 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03755 365 PANTHER SERINE/THREONINE KINASE 16 360 - -
Aip10g03755 365 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E-LIKE 16 360 - -
Aip10g03755 365 Gene3D Transferase(Phosphotransferase) domain 1 102 290 - -
Aip10g03755 365 Gene3D Phosphorylase Kinase; domain 1 8 101 - -
Aip10g03755 365 SMART serkin_6 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03755 365 CDD STKc_SnRK2 25 281 - -
Aip10g03755 365 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Aip10g03755 365 ProSiteProfiles Protein kinase domain profile. 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03755 Aip-Chr10 135326420 135329566 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03755 25 303 CBL-interacting serine-threonine protein kinases AT5G25110 43.686 1.38e-70 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aip10g03755 Pkinase 8.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03755 K14498 - gmx:100804702 639.032