Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03749 ATGGCTCATCATCATCACCCTAAATTATTAGCTTCTTCTTTTCTCATCCTCTTTACTTTCTCTTCTCTTTCAACATTTTCACATGCACACTTTCTTCTAGAAGAACTTCATTTCAACAATGAGAGGCTTAAGAATGCCTATGTTGCTCTCCAAGCATGGAAACAAGCTATCTACTCTGATCCTTACAACACAACCGCTAATTGGGTTGGCAGCGATGTTTGCTCCTACAATGGCGTCTTCTGCGCTCCCGCTCTCGACGATCCCTCCCTCGACGTCGTCGCCGGCATCGACCTTAATCATGCTGACATTGCCGGACACCTTCCCGGAGAGTTAGGCCTCTTGACCGACTTGGCGCTTTTCCACATCAATTCCAACAGGTTTTGCGGAATCGTACCTCCATGCATGGAGAATCTAACCCTCATGCACGAATTTGACATAAGTAACAACCGATTCGTTGGTGGATTTCCCAACGTGGTTCTCAAATGGTCAGACATGAAGTATCTGGATCTTAGATACAACGATTTCGAAGGGTCTTTGCCGCCGCAACTGTTCGAGATGGATCTGGATGCAATCTTCTTGAACAATAACCGTTTCACCTCTGTTCTCCCTGCCACTCTCGGCAAATCCAAGGCTTCGGTTATTACTTTCGCTAACAACAAGTTCACAGGCTGCATTCCGAAATCGATTGGAAAGTTGAACAAGTTGAATGAGATTCTCTTCATGGGGAACAAACTGGGTGGTTGCTTCCCTCAAGAGATTGGAATGATGGAGGATTTGAATGTTTTGGATCTTAGCGACAACAATTTTGTAGGTACTCTGCCTAACATGACGGGTTTGCAGAACGTGGAGGTTATAGACATTGCAAGGAATGAGCTTAGCGGTTATGTGTCTGATTCTGTTTGTCAATTACCTTCTCTGAAGAACTTCACTTACTCTGATAATTACTTCAACGGGGAAGCTCCAGCTTGTGCTGTTGCTGTTGCTGCTTATAAGGGTTCAATTAGTACAACTGTTTTTGATGACTCAGGAAATTGTTTGACTGGAAGGAAGAATCAAAAGAAAACTAGGGTGTGTTTGCCGGTACTAACTCGGCCTGTAGATTGTAGCAAGGCTTGTGGTGACGGAGAAGGAGGTGGTAATAATAATAATAATAAGGCCCCCTCGTTAACACCGAAAAAGTCACCTCCAAAGCCAAAGGTTAGTAAACCACATTCACCACCACCACCATCACCACCACCACCAGTTAGTTCTCCTCCTCCTCCTCCATCCCCTGTTTACTCACCACCACCACCACCTACATACTCTCCTCCTCCTCCTCCACCAGTGCACTCTCCACCGCCACCAACTCAATCACCTCCCCCACCACCACCAGTTTACTCTCCCCCACCTCCAACTATGTCACCTCCTCCTCCACCCCCAGTGTTCTCTCCACCACCACCAACTCGGTCACCACCACCTCCCCCAGTTTACTCGCCACCACCACCAACTTACTCACCTCCTCCTCCAACCCCAATATACTCACCACCACCACCAACTAAGTCACCTCCTCCACCCCCAGTTTACTCGCCACCACCACCAGCATGGGATGATGATGTCGTCCTCCCACAACACTTTGGATCTGCATACAGGTCACCTCCTCCACCGGCTATTATTGGATACTAA 1662 0.4747 MAHHHHPKLLASSFLILFTFSSLSTFSHAHFLLEELHFNNERLKNAYVALQAWKQAIYSDPYNTTANWVGSDVCSYNGVFCAPALDDPSLDVVAGIDLNHADIAGHLPGELGLLTDLALFHINSNRFCGIVPPCMENLTLMHEFDISNNRFVGGFPNVVLKWSDMKYLDLRYNDFEGSLPPQLFEMDLDAIFLNNNRFTSVLPATLGKSKASVITFANNKFTGCIPKSIGKLNKLNEILFMGNKLGGCFPQEIGMMEDLNVLDLSDNNFVGTLPNMTGLQNVEVIDIARNELSGYVSDSVCQLPSLKNFTYSDNYFNGEAPACAVAVAAYKGSISTTVFDDSGNCLTGRKNQKKTRVCLPVLTRPVDCSKACGDGEGGGNNNNNKAPSLTPKKSPPKPKVSKPHSPPPPSPPPPVSSPPPPPSPVYSPPPPPTYSPPPPPPVHSPPPPTQSPPPPPPVYSPPPPTMSPPPPPPVFSPPPPTRSPPPPPVYSPPPPTYSPPPPTPIYSPPPPTKSPPPPPVYSPPPPAWDDDVVLPQHFGSAYRSPPPPAIIGY 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03749 553 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 14 533 - -
Aip10g03749 553 Gene3D Ribonuclease Inhibitor 44 341 IPR032675 -
Aip10g03749 553 PRINTS Proline rich extensin signature 385 397 - -
Aip10g03749 553 PRINTS Proline rich extensin signature 400 416 - -
Aip10g03749 553 PRINTS Proline rich extensin signature 421 433 - -
Aip10g03749 553 PRINTS Proline rich extensin signature 436 457 - -
Aip10g03749 553 MobiDBLite consensus disorder prediction 370 553 - -
Aip10g03749 553 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 533 - -
Aip10g03749 553 SUPERFAMILY L domain-like 47 321 - -
Aip10g03749 553 Pfam Leucine rich repeat N-terminal domain 47 81 IPR013210 -
Aip10g03749 553 MobiDBLite consensus disorder prediction 391 530 - -
Aip10g03749 553 MobiDBLite consensus disorder prediction 376 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03749 Aip-Chr10 135301298 135303003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03749 9 370 Trihelix Transcription Factor Family AT1G49490 60.212 2.01e-164 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03749 - - aip:107621173 748.429