Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03729 ATGCGCCATCGCAACGTTCCTCAATCCATGGACCTCGAGATGGAAGCCACAGGATTCGAATCCGAAGAAGAAGAAGAGGAAGAAGACGATGAAGACGACGAAGAAGAACAACATCCACAAACCAATAACAATGACAATAACAACTACAACAACCCTTCTTCCTCCAACTCAAACCCTAACAGCACCACTGAGCCCTACATCGGCATGGAGTTCGACTCCGAGCTATCCGCACGCGCCTTCTACAACGCCTACGCGCGTCGCATCGGCTTCAGCACGCGCGTCAGCGTTTGTCTCCGCTCCCGAAAGGACTCCTCCGTCATCCGCCGCCGTGTTGTATGCTCCCGAGAGGGCTTCCGCCGCAACCCTGAGAACCACGACCCTAAGCGCCACCGCTCCGTGACACGTGTCGGCTGCAAAGCTCAGATCACCGTCAAGAAGAAGGGCCCACTCGGCAAGTGGTACATCTCCAAGTTCATCAAAGACCACAACCACGACCTCGTCCCTCCGGATAGGGTCCACTGCCTCCGCTCCCACCGCCGCGTCAACGGTGCCGCCCGCAGCCTCATCGATACTCTTCACGCAGCTGGCATGGGCGCTGCCGAGGTCATGACGGTGCTCATCAAGGAGTCTGGCGGCATCGACAACGTCGGCTTCACAAAAGTTGACTGCCAGAACTACATGACGTCATCTTCTAAGAGGAGCCTCGGGAGTGGGAACCAGCTTGTCTTCGATTTCTTGAAGAAGATGAGTGAGGAGGATCCTTCTGGATTCTTCTACTCCTTCCAGGGCGATTCGGAGAGTTCCTCAGGTAACATCTTTTGGGCTGATGGCAATGCCAGGAGGAATTATGAATATTTTGGAGATGCTGTTGTTTTCGATATGGCGTATCGGAGGGGACGCTATAAAGTCCCCTTTGCGCCTTTTACTGGATGGAACCATCACGGGCAGCCGGTGCTCTTCGGCTGCGCCCTGATGCTCAATGAATCCGAGGCGTCCTTCGTGTGGCTTTTTACCACATGGCTTCAAGCAATGTACGGCCGGCATCCTGTGTCCATTACTACTGATCAGGACAGGATAATTCACTCTGCTGTCTTGCAGGTTTTCCCGGATACTCGTCACCGGTTCTCCAAGTGGGACGTGTTTGGTGAGGTTCAGGAGAGGCTGATTGATGTGTGTGGAGTGCATCCTGAGTTTGAGTCTGAGTTTCGACGGTGCGTGAACTCGGCAGAGACAGTTGATGAGTTTGAGTCTAGCTGGAAGTTCCTTGTTGGGAGGTATGAGCTTCTGGATAATGAATGGCTTCAGTTGATGTACAGGAATCGCCATCAATGGGTGCCTGTTTATCTCCGCGACACCTTTTTTGGCGATTTGTCTGCCATCCATGGGAGTGATACGAGCAGCTCGTACTTTGATGGGTTTATTAATGCGACGACTACCGTCCAGACACTGATTAAGCAGTATGAGAAAGGAGTCGCGGATCGATATGAGAAGGAAGTGAAGGAGGATTATGATACGCTGAATACCGCACCGGTTTTGAGAACTCCTTCTCCAATGGAAAAACAAGCGGCTGGTCTCTACACGAGGAAAATATTTGCAAGGTTCCAAGAGGAATTGGTTGAGACCCTTGCATATGCTGCTACGTTGATGGATGATGCAAGATCACAAGCTACTTATCGGGTGGCGAAGTACGGGGAGGAGAATAGGGCGCATTTTGTTAGGTTCAATGTCTTCAGGAAGAAAGCTAGCTGCAGCTGCCAAATGTTTGAGTTTGCGGGTCTTGTCTGTAGGCACATATTAGCAGTTTTTAGGGTCATCAATATTCTTACGCTTCCGTCCCATTACATCTTGAAAAGGTGGACAAGAAACGCAAAGAGTATCTTGTTGGATAAAGGAGCACGGGAATTGCAAAATAATCTGGAAGAGTGTTACTCCTCTCGCTACGATAGTTTGAGCCGGGAAATTATGAGTTATGTAGAAATGGGGGCAGAATCATCGGATACTTATAGCGTTGCGCTGAATGGTCTACGCGAGGCTGCGAAAAAGGTTGCGGATGCAAAGAAACCTCGTCCAGCACCCGTGCAAAGTACTTCAGATAATAATGAAAACCATGAGAGTAGTCAATCTAGTGATACAGATCAGGATAAGAAAATTCAAGAGTTGACTACTGAGTTAGAGGGTGCTCGGCAGCGATGTGAATCGTATAGGCAAAACCTGTTTGGCTTACTAAAAAATATGGAGGAGCAGAAGTTAAAAATATCTGTTAAGGCTCAGAGTGTTAGGCTAAATCTAGGAAGTGAATTGGTAGCTGAAGAAAGTAAGTAG 2322 0.4957 MRHRNVPQSMDLEMEATGFESEEEEEEEDDEDDEEEQHPQTNNNDNNNYNNPSSSNSNPNSTTEPYIGMEFDSELSARAFYNAYARRIGFSTRVSVCLRSRKDSSVIRRRVVCSREGFRRNPENHDPKRHRSVTRVGCKAQITVKKKGPLGKWYISKFIKDHNHDLVPPDRVHCLRSHRRVNGAARSLIDTLHAAGMGAAEVMTVLIKESGGIDNVGFTKVDCQNYMTSSSKRSLGSGNQLVFDFLKKMSEEDPSGFFYSFQGDSESSSGNIFWADGNARRNYEYFGDAVVFDMAYRRGRYKVPFAPFTGWNHHGQPVLFGCALMLNESEASFVWLFTTWLQAMYGRHPVSITTDQDRIIHSAVLQVFPDTRHRFSKWDVFGEVQERLIDVCGVHPEFESEFRRCVNSAETVDEFESSWKFLVGRYELLDNEWLQLMYRNRHQWVPVYLRDTFFGDLSAIHGSDTSSSYFDGFINATTTVQTLIKQYEKGVADRYEKEVKEDYDTLNTAPVLRTPSPMEKQAAGLYTRKIFARFQEELVETLAYAATLMDDARSQATYRVAKYGEENRAHFVRFNVFRKKASCSCQMFEFAGLVCRHILAVFRVINILTLPSHYILKRWTRNAKSILLDKGARELQNNLEECYSSRYDSLSREIMSYVEMGAESSDTYSVALNGLREAAKKVADAKKPRPAPVQSTSDNNENHESSQSSDTDQDKKIQELTTELEGARQRCESYRQNLFGLLKNMEEQKLKISVKAQSVRLNLGSELVAEESK 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03729 773 Pfam MULE transposase domain 290 379 IPR018289 -
Aip10g03729 773 ProSiteProfiles Zinc finger SWIM-type profile. 574 606 IPR007527 GO:0008270
Aip10g03729 773 Coils Coil 717 737 - -
Aip10g03729 773 MobiDBLite consensus disorder prediction 16 38 - -
Aip10g03729 773 MobiDBLite consensus disorder prediction 41 66 - -
Aip10g03729 773 Pfam SWIM zinc finger 580 605 IPR007527 GO:0008270
Aip10g03729 773 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 703 IPR031052 GO:0006355
Aip10g03729 773 MobiDBLite consensus disorder prediction 681 716 - -
Aip10g03729 773 Pfam FAR1 DNA-binding domain 80 168 IPR004330 -
Aip10g03729 773 SMART 26again6 581 608 IPR006564 GO:0008270
Aip10g03729 773 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 55 703 - -
Aip10g03729 773 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03729 Aip-Chr10 135163228 135168808 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip10g03729 MULE 3e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03729 - - qsu:112029984 976.852