Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03727 ATGGATTCTCTGATCCTTGACTTGCTAGCTCTTGTCACCTTCATAGTCTGTATTGTTTTGGCCCTGATAATTGGAAGGAGTCTCAAGAAAATTGAGTCAACTGCAAACATACCCCCAGGGCCATGGAAGCTACCTATTATAGGAAACATACACCATCTTGTTACATCCAAACCACATCAAAGATTAAGAGATTTGGCCAATATATATGGGCCATTGATGCACCTTCAACTTGGAGAGATCTCAACCATTGTTATCTCTTCACCAGAATATGCTAGAGAGGTAATGAAAACCCATGATGTTGTGTTTGCATCAAGGCCTAAAATTCTGGCTACAGAAATAATGTCTTATGGTTCAACAAATATAGTTTTTGCACCTTATGGAAATTATTGGAGACAGCTGAGGAAGATTTGCATGTTGGAGCTTTTCACCCCCAAAAGGGTCAAGTCATTCCAGCCAATAAGAGAAGAAGAGCTTACCAATCTCATAAAAAGGATTGCATCGGCGAAAGGATCAACTGTCAACCTCACTGAAGAAGTACTTTCATCAGTATATACAATCAATTCCAGGGCTGCATTTGGCATGAAATGTAAAGATCAAGAAAAATACATTTCAGTTATAAAAGAAGCAACAATGGTTGCTGCAGGTTTTGATTTAGGAGATTTGTTTCCTTCTTCCAAATGGATTCAACTTGTCAGTGGCTTGAGGCATAAGCTTGAGAGGCTGCAAAGACAAAGTGATCAAATACTGGAAAACATCATCAATGAGCACAGAGAGGCAAAGTTAAGAGCCAGAGAAGGTGAAAATGAATCAGATCATGATCTCATGGATGTTCTCCTAAAATTTGAGGGTGGTAATGCATCCAGCCATGATATATGCATAACTACAGATAACATTAAAGCCATCATACAGGACATATTTGGAGCTGGAGGTGAGACAGCATCAACTACTATAGATTGGGCAATGGCAGAGATGATGAAGGACCCAAGAGTAATGCAGAAAGCACAGGTCGAGGTGAGAGAGATATTCGACATGAGTGGAAGTGTTGATGAGACTTACATGGATGAACTCAAGTATTTGAAAGCAGTGGTCAAAGAGACCCTCAGGTTACACCCTCCAGCTCCACTTTTGATTCCAAGAGAATGTAGAGAAGCATGTGAGATTAATGGATATCACATAGCTGTGAAAAGTAAGGTGATTGTGAATGCTTGGGCAATTGGAAGAGATCCAAAGTACTGGAGTGAAGCAGAGAGGTTTTATCCAGAGAGATTTATTGATAGTAGCATTGACTACAAAGGAAGCAATTTTGAATACATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCATCACATTAGGCTTGATGAATGTAGAGCTGGCCCTTGCATATTTGCTGTATCACTTTGATTGGGAGCTTCCTAATGGTGTCAAATGTGAGGACTTGAACATGACTGAGCAATTTGGAGTTACTGTTAGAAGAAAAGATGACCTGCAATTGATTCCTATTGCTTCTCATTGTTTGCATGAACAACATAAATAA 1539 0.3977 MDSLILDLLALVTFIVCIVLALIIGRSLKKIESTANIPPGPWKLPIIGNIHHLVTSKPHQRLRDLANIYGPLMHLQLGEISTIVISSPEYAREVMKTHDVVFASRPKILATEIMSYGSTNIVFAPYGNYWRQLRKICMLELFTPKRVKSFQPIREEELTNLIKRIASAKGSTVNLTEEVLSSVYTINSRAAFGMKCKDQEKYISVIKEATMVAAGFDLGDLFPSSKWIQLVSGLRHKLERLQRQSDQILENIINEHREAKLRAREGENESDHDLMDVLLKFEGGNASSHDICITTDNIKAIIQDIFGAGGETASTTIDWAMAEMMKDPRVMQKAQVEVREIFDMSGSVDETYMDELKYLKAVVKETLRLHPPAPLLIPRECREACEINGYHIAVKSKVIVNAWAIGRDPKYWSEAERFYPERFIDSSIDYKGSNFEYIPFGAGRRICPGITLGLMNVELALAYLLYHFDWELPNGVKCEDLNMTEQFGVTVRRKDDLQLIPIASHCLHEQHK 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03727 512 Coils Coil 231 269 - -
Aip10g03727 512 SUPERFAMILY Cytochrome P450 38 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 Pfam Cytochrome P450 38 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Aip10g03727 512 Gene3D Cytochrome P450 23 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PANTHER CYTOCHROME P450 71B11-RELATED 9 505 - -
Aip10g03727 512 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip10g03727 512 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03727 Aip-Chr10 135146505 135148346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03727 8 501 Cytochrome P450 AT3G26310 41.118 6.29e-138 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03727 - - gmx:102665189 768.459