Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03721 ATGGAGAAGGTGGCTCCTCCGATCTTTATGCACCAAGCACTTCAAAGTCGGTTCTGTGATGTACCGATGACTACTACCGCCACCACGAAGAAGCGCGATCTGTCGTACGACGTCGATAAGAGCAGCTCCAACGGTAATTGGAATCCAAACGCGTGGAGCTGGGACAGTGTCAGGTTTATCGGGAAGCCAGTACCGCAGCAAAACGGTGTCGTTTCAGTTGAGGAAGAAACGCTGCGTTTAAATCTCGGTAGCAGTGGTGTTAGTGGCAGCGGCGGAAGCGTTGACCCGAGCGTGTCGCGGCCGAGTAAGAGAGTGCGTTCTGGTTCACCCACCGGAACGGCGTCGTATCCGATGTGCCAGGTGGATAACTGCAAGGAAGATCTGTCAAGTGCAAAAGACTATCATAGAAGGCACAAAGTGTGTGAGCTTCATAGCAAAGCCTCGAAGGCCCCCCTTGGGAACCAAATGCAAAGGTTCTGCCAGCAGTGTAGCAGGTTTCACCCTTTGACGGAGTTTGATGAAGGGAAGCGAAGCTGTAGACGTAGACTGGCTGGGCACAACCGCCGGAGAAGAAAGACCCAACCGGAAGATGTCACGTCGCAGCCTGAGAGTGTGGCTACTGGAAATGCAGAAATCTTCAATTTATTGAGTGCCATAGCAAGTTCACAAGGTCAGAAGCCAAATGGTAAGTTTGAGGACAGAAGCAAGATTGCGTCACAAGTTCCGGATAAAGACCAGCTTGTTCAGATTCTTAATCGGATACCGTTGCCAGCTGATCTTGCAGCAAAGTTGCTCAATGTTGGCGGTAAAGGTCAAATACAAACTTCATCTTATCATCATGACAAAGTGAACCAGAGCAATTCTGGTCCATTAACGAAGGACTTGCTTGCTGTTCTTTCAACCACTTTATCAGCATCTACTCCCAACTCTCAAAAGAGTAGCCAGAGTAGTGACAGTGAGAAGTCTAGGGCTAGTGCTGACCAAGTTGGTGAAAGTTTACAAATGAGACAATATCCACAAGAATTTGCTTCTGTTGGAGACGAAAGAAGTAGTGGCAGTTCGCAATCTCCAGTTGAAGATTCAGACTTCCCAGAAGTTCGAGTTAATTTGCCACTGCAACTCTTTAGTTCTTCTCCTGAAGTTGGCAACCCGCCAAAATTGACACCTTCGCAAAAGTATTTCTCTTCTGACAGCAGTAATCCTGTGGAAGAGAGGTCACCATCATCTTCCCCTGCTGTGGACAATCAATTCGATTTGCAAGGTGTGGCTAGAGGTCTCAAGGCTGACGGCGTTCCAAGCAGAAGAGAAGTAAATGCAAATAAAGAAGCTAGCCAAAGTCAAAGTTATAATATATCTCTTAATCTCTTTAATGCGCCAAATAGCAGAGTCCAGCCTAGCTCACTTCAAAGTGTTCCATTTCAAGCTGGATATGCATCTTCTGGTTCTGATCACTCACCTCCAAGTTTGAATTCAGATGCTCAGGATCGCACTGGGAGAATAATGTTCAAGCTATTTGACAAAGATCCTAGTCATTTCCCTGGAACACTGCGAACACAGATTTACAATTGGCTTTCTAATAGTCCATCAGATATGGAGAGCTACATTAGGCCGGGCTGCGTGGTACTGTCGCTTTATGCTTCAATGTCCTCTGCTGCCTGGGAGCAACTAGAAGAAAACTTCCTGCAACATGTCCATTCTTTAATTCAAAGCAATTCCGACTTTTGGAGAATTGGAAGGTTTCTGGTTCATTCTGGCAATCAGTTAGCATTACACAAAGATGGAAAAATTCACTTATGCAAGCCATGGAGAACTTGGAGGTCTCCTGAATTGATATCAGTGTCCCCTTTGGCAATTGTTAGTGGACAAGAAACCTCTTTTTCATTGAAGGGTAGAAACCTGTCAAATCCTGGCACCAAGATTCATTGCACAGGTACTGGCGGTTACACGCCCATAAAAGTTGTTGAATCTGCATGTTATGGTATGACCTATGACAAGATAAAATTGAGTGGTATTAAAGTTCAGGATGCTTCTCCTGGTCTTTTGGGTCGCTGTTTTATCGAGGTAGAAAATGGTTTCAAGGGTAGCAGTTTTCCAGTGATAATAGCTGATGCAACCATTTGTAAGGAATTGAGACCACTTGAATCTGAATTCGACAAGGAAGAAAATGCAAGTGATGCCATTTCAGATGAGCATGGATATGATCTTGGAAGACCAAGGTCAAGGGAGGAGACTCTACACTTCCTGAATGAGCTTGGGTGGTTATTCCAAAGAAAAAGGTTCTCATATACGGATTTGGTTCCAGATTATTCACTTGACAGATTCAGATTCATACTTACATTTTCTGTGGAAAGAAATTGCTGTATGCTAGTTAAAACACTCTTGGATATGTTGGTTCAAAAATACTTGGAAGGCCAATGGTCGTCAACGGCATCATTGGAGATGCTCAACGCAATCCAACTCCTGAATAGAGCGGTTAAAAGAAAGTATGTTAACATGGTTGATTTGCTCATTCAGTATGCTGTGCCTAGCAACAATGATGCATCCCGGAAGTACGTATTTCCGCCAAATGTTGCTGGCCCTGATGGTATTACGCCATTGCACTTGGCAGCATGCACATCGTCATCTGAGGGTGTAATTGACTCTTTGACAAATGATCCGCAGGAGATTGGGTTGAACAGCTGGGATTCTCTTCTAGATGCAAATGGGCAGACTCCGCATGCTTATGCCATGATGAGGAATAATCATTCTTATAATGTGCTGGTTGCTCGAAAACTCTCCAATAGAAGAAGAGGCCATGTTTCAGTAACAATTAATAGCGAGATAGAGCATTCATCAATGGACATCGAGCTTAAGCAAAGGCAAAGTGACCAAACCAAAAGAGGTCAGAATTCCTGCACTAAGTGTAGTGCAATGGCGGATGTTCGTTACAGCAGCAGAATCCCTGGTTCACGGAGCTTTGGTCACCACCGACCCTTTATTCATTCGATTCTAGCTATTGCCGCTGTATGTGTCTGTGTCTGTCTGTTCTTGCGAGGACACCCTTGGGTTGGCTCGGTTACGCCCTTCAATTGGGAGAAGTTGGATTATGGCACCATATAA 3099 0.4492 MEKVAPPIFMHQALQSRFCDVPMTTTATTKKRDLSYDVDKSSSNGNWNPNAWSWDSVRFIGKPVPQQNGVVSVEEETLRLNLGSSGVSGSGGSVDPSVSRPSKRVRSGSPTGTASYPMCQVDNCKEDLSSAKDYHRRHKVCELHSKASKAPLGNQMQRFCQQCSRFHPLTEFDEGKRSCRRRLAGHNRRRRKTQPEDVTSQPESVATGNAEIFNLLSAIASSQGQKPNGKFEDRSKIASQVPDKDQLVQILNRIPLPADLAAKLLNVGGKGQIQTSSYHHDKVNQSNSGPLTKDLLAVLSTTLSASTPNSQKSSQSSDSEKSRASADQVGESLQMRQYPQEFASVGDERSSGSSQSPVEDSDFPEVRVNLPLQLFSSSPEVGNPPKLTPSQKYFSSDSSNPVEERSPSSSPAVDNQFDLQGVARGLKADGVPSRREVNANKEASQSQSYNISLNLFNAPNSRVQPSSLQSVPFQAGYASSGSDHSPPSLNSDAQDRTGRIMFKLFDKDPSHFPGTLRTQIYNWLSNSPSDMESYIRPGCVVLSLYASMSSAAWEQLEENFLQHVHSLIQSNSDFWRIGRFLVHSGNQLALHKDGKIHLCKPWRTWRSPELISVSPLAIVSGQETSFSLKGRNLSNPGTKIHCTGTGGYTPIKVVESACYGMTYDKIKLSGIKVQDASPGLLGRCFIEVENGFKGSSFPVIIADATICKELRPLESEFDKEENASDAISDEHGYDLGRPRSREETLHFLNELGWLFQRKRFSYTDLVPDYSLDRFRFILTFSVERNCCMLVKTLLDMLVQKYLEGQWSSTASLEMLNAIQLLNRAVKRKYVNMVDLLIQYAVPSNNDASRKYVFPPNVAGPDGITPLHLAACTSSSEGVIDSLTNDPQEIGLNSWDSLLDANGQTPHAYAMMRNNHSYNVLVARKLSNRRRGHVSVTINSEIEHSSMDIELKQRQSDQTKRGQNSCTKCSAMADVRYSSRIPGSRSFGHHRPFIHSILAIAAVCVCVCLFLRGHPWVGSVTPFNWEKLDYGTI 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03721 1032 ProSiteProfiles Zinc finger SBP-type profile. 116 193 IPR004333 GO:0003677
Aip10g03721 1032 SUPERFAMILY SBT domain 117 197 IPR036893 GO:0003677|GO:0005634
Aip10g03721 1032 MobiDBLite consensus disorder prediction 183 205 - -
Aip10g03721 1032 Gene3D - 782 946 IPR036770 -
Aip10g03721 1032 Gene3D - 110 180 IPR036893 GO:0003677|GO:0005634
Aip10g03721 1032 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 37 1032 IPR044817 GO:0003677
Aip10g03721 1032 MobiDBLite consensus disorder prediction 466 493 - -
Aip10g03721 1032 Pfam SBP domain 119 192 IPR004333 GO:0003677
Aip10g03721 1032 MobiDBLite consensus disorder prediction 303 363 - -
Aip10g03721 1032 MobiDBLite consensus disorder prediction 375 415 - -
Aip10g03721 1032 MobiDBLite consensus disorder prediction 82 115 - -
Aip10g03721 1032 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 14 37 1032 - -
Aip10g03721 1032 SUPERFAMILY Ankyrin repeat 820 916 IPR036770 -
Aip10g03721 1032 MobiDBLite consensus disorder prediction 303 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03721 Aip-Chr10 135097903 135103417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03721 3 1032 SBP-box Gene Family AT1G20980 50.419 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aip10g03721 SBP 7.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03721 - - lang:109360589 1412.51