Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03686 ATGCAAAATCCAGTGCAACTCCAACCTCCAGATGGCACTGAATGGAGAATAGATTGGACTAATCATGATGGTGAGATTCTGTTTGAAAACGGTTGGAAAGAGTTTGCTACATTTTACACTTTGGAGAATGGTCATTCTAACATCAAAGTACACATATTCGACATGAGTGCCCTCGAAATTGATTATCCTTCCAATGGCCGAATCGGTGATGACAACTCGATGAACCGCCAGCGCGAAGGGGCCGAGGCCGGCCAAAGAAAACAGTGA 267 0.4494 MQNPVQLQPPDGTEWRIDWTNHDGEILFENGWKEFATFYTLENGHSNIKVHIFDMSALEIDYPSNGRIGDDNSMNRQREGAEAGQRKQ 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03686 88 MobiDBLite consensus disorder prediction 72 88 - -
Aip10g03686 88 ProSiteProfiles B3 DNA-binding domain profile. 1 66 IPR003340 GO:0003677
Aip10g03686 88 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 74 - -
Aip10g03686 88 MobiDBLite consensus disorder prediction 64 88 - -
Aip10g03686 88 PANTHER B3 DOMAIN-CONTAINING 2 74 - -
Aip10g03686 88 Gene3D - 1 57 IPR015300 -
Aip10g03686 88 SUPERFAMILY DNA-binding pseudobarrel domain 4 63 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03686 Aip-Chr10 134906972 134907238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03686 5 66 B3 DNA Binding Superfamily AT3G18990 36.620 2.06e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03686 - - ahf:112786616 191.815