Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03671 ATGTGTGAGGGCTTGCCACTTGGAATCAATGTGATGGCAAGATTGATGAAAGGGATAAATGATGACATTAATATCTGGAAATATACACAGAGCAAACTTGAAGATTCATCAATGGGAGAAGACATGGAAAAAGAGGTTATAAAGGTATTAAAACGAAGCTATGACCACCTGGCAGACAAGACTATTCAAAACTGTTTCTTGCAACATGCATTATACAGTGATGTTTCACCTGAGGTGTTTATTATGAATCTCGTTGATGAAGGGTTAATACAATCAACGAGTAGTTTGGAAAAAATATTTGTCCAAGGGGAAGCAATATTAGCCAAACTCAGTAGCCATTCATTGATATCTCGGAAGCTTCCAACGGAATTCACAAACAAATATGGATTGAAACTCCCAAATCCGGTGATTCTGAAAGTTGTAAATGGCAACCAAAAGAAAGTGCATTGGACCAATATTAATGGTTCCATTTGGTTTATTGGGAAGGAATGGAAAGAGTTTCTTGAGCACTACTCTGTCTCCCATGGCCACCTTTTATTGTTCAAATATTGTCTTGATGCTTCATATTTTAGGGTCCAAATATTTTATAACACTACTCTTGAAATTGATTACCCTTCTCCTGAACTCAATTATGCTGATTATGATGATGATGATTTTGATTTTGATGATGATGGTGATGGTGATGGGGATGGTGATGATGATGTTATGAAGGTTCACTATGATCAATATCAATTCTGA 738 0.3631 MCEGLPLGINVMARLMKGINDDINIWKYTQSKLEDSSMGEDMEKEVIKVLKRSYDHLADKTIQNCFLQHALYSDVSPEVFIMNLVDEGLIQSTSSLEKIFVQGEAILAKLSSHSLISRKLPTEFTNKYGLKLPNPVILKVVNGNQKKVHWTNINGSIWFIGKEWKEFLEHYSVSHGHLLLFKYCLDASYFRVQIFYNTTLEIDYPSPELNYADYDDDDFDFDDDGDGDGDGDDDVMKVHYDQYQF 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03671 245 SUPERFAMILY DNA-binding pseudobarrel domain 113 205 IPR015300 -
Aip10g03671 245 Gene3D - 1 58 IPR042197 -
Aip10g03671 245 Gene3D - 100 199 IPR015300 -
Aip10g03671 245 CDD B3_DNA 110 195 IPR003340 GO:0003677
Aip10g03671 245 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 115 217 - -
Aip10g03671 245 SMART B3_2 106 198 IPR003340 GO:0003677
Aip10g03671 245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 67 IPR027417 -
Aip10g03671 245 PANTHER B3 DOMAIN-CONTAINING 115 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03671 Aip-Chr10 134771514 134772478 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03671 83 205 B3 DNA Binding Superfamily AT1G49475 34.109 6.86e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03671 - - aip:110268509 465.307