Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03637 ATGGGTTGCAAGGCTTTTCTAATTCTAGCTATGTTAATGGCCACCATCTTTGTGGCATCTACCGATGAAGTAGCACCAGGAGACTTAGATGAGAAATTTGAACAAAATGATGGAGCTGTTAATAGTCAAAATTACCGAACTGTTAGAGACAAAATCCTTCCATTCAACAAAGTTGTTGTCGATTCTTTGGGACATGGCAACTTCTCTACAATTCAATCTGCCATTGATTCTGTCCCTTCCAACAATAAGTATTGGATTTTAATCAATGTCACTGCTGGTATTTACAGGGAGAAAGTGACGATTCCAATTGATAAACCATACATAATATTGAAGGGAAGTGGAAAGATGAGAACGTGGGTTGAATGGGATGACCATAATACAACAGCTCAGAGCCCCACGTTCCAATCCGATGCTGATAATAGCTGCAATGATAAGTGGGAACAAAGGTGTAGCATAAATGTGATTGGAAGGGCATTAGGAAAATGGTTTGTAGGATATATAACAGCACAAGCAAGAGAAAATCCAAAAGATTCAAATGGATTTGTGTTCAAGAATTGCAATGTCTCTGGAAATGGTTCTACCTTTTTGGGAAGACCTTGGAGACCTTATGCTAAAGTTCTTTTCTACAATACAAGTATGGCCAACATTATTCAACCCGCTGGTTGGGACCTATGGGATTCCTCTCAACATGAGTAA 696 0.3908 MGCKAFLILAMLMATIFVASTDEVAPGDLDEKFEQNDGAVNSQNYRTVRDKILPFNKVVVDSLGHGNFSTIQSAIDSVPSNNKYWILINVTAGIYREKVTIPIDKPYIILKGSGKMRTWVEWDDHNTTAQSPTFQSDADNSCNDKWEQRCSINVIGRALGKWFVGYITAQARENPKDSNGFVFKNCNVSGNGSTFLGRPWRPYAKVLFYNTSMANIIQPAGWDLWDSSQHE 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03637 231 Gene3D - 143 231 IPR012334 -
Aip10g03637 231 PANTHER PECTINESTERASE 10-RELATED 149 230 - -
Aip10g03637 231 SUPERFAMILY Pectin lyase-like 57 228 IPR011050 -
Aip10g03637 231 Gene3D - 55 142 IPR012334 -
Aip10g03637 231 Pfam Pectinesterase 58 137 IPR000070 GO:0030599|GO:0042545
Aip10g03637 231 Pfam Pectinesterase 148 228 IPR000070 GO:0030599|GO:0042545
Aip10g03637 231 PANTHER PECTINESTERASE 10-RELATED 44 141 - -
Aip10g03637 231 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 44 141 - -
Aip10g03637 231 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 149 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03637 Aip-Chr10 134575125 134578755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03637 58 222 Carbohydrate Esterase AT5G07430 27.234 2.43e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03637 - - gmx:100818719 214.157