Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03629 ATGAGTTCCTATGGTACTCAAGCTTTGGCACACTTGTTTGGCATCTTGGCCATCATACTCTTGCTTGTTTGGTTGTTGCATTTTCGCGAGGGAATCGACTATGATTCGGACAACGGGTTTCGAGTCTTCAACGTTCACCCTTTAATGATGTTCATGGGGTTTATTTTCCTGGGTGGTGAAGCTATATTATCATTCCAAACAATACCAAGCCAAAGGCAAACCAAGAAGTTTTTCCACATGATGCTTCATTTAATCTCTATAATTCTTGGGATTGTTGGTTTATGTGCCGCTTTCAAGTTCCATAATATGATGGGATTTCCCAATGTCTATAGCCTCCATTCATGGATTGGCATTGGCACCTTTTGCTTGTCTGGATTACAGTGGCTTGTTGGATTTGTTACATTCATGTTTCCGAGAGCTGCGGATCGAACAAGAACAAGAGTGGTTCCATGGCACGTAGCTGGTGGGAGGGCGCTGTTGTTCATGGCCGTGTGTGCCGCGGAAACAGGCTTAATGGAAAAGTATGGTTTCTTGCGCGCGAAGTCAAATCTGCAGCCACACCAAAGAGAATCATATTTGATAAACTTCACTGGTCTTGCAATTCTCTTATTTGGAGTTTTTGTGGACCTTTCTGTTTCTCTTCGTCGTAATTCTGTATAA 660 0.4288 MSSYGTQALAHLFGILAIILLLVWLLHFREGIDYDSDNGFRVFNVHPLMMFMGFIFLGGEAILSFQTIPSQRQTKKFFHMMLHLISIILGIVGLCAAFKFHNMMGFPNVYSLHSWIGIGTFCLSGLQWLVGFVTFMFPRAADRTRTRVVPWHVAGGRALLFMAVCAAETGLMEKYGFLRAKSNLQPHQRESYLINFTGLAILLFGVFVDLSVSLRRNSV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03629 219 CDD Cyt_b561_ACYB-1_like 36 178 - -
Aip10g03629 219 PANTHER CYTOCHROME B561-RELATED 5 215 IPR043205 GO:0016491
Aip10g03629 219 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 5 215 - -
Aip10g03629 219 SMART 561_7 45 171 IPR006593 -
Aip10g03629 219 Pfam Eukaryotic cytochrome b561 45 175 IPR006593 -
Aip10g03629 219 ProSiteProfiles Cytochrome b561 domain profile. 9 213 IPR006593 -
Aip10g03629 219 Gene3D - 2 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03629 Aip-Chr10 134512323 134513998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03629 9 216 Chloroplast and Mitochondria Gene Families AT1G14730 54.808 9.08e-80 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03629 K08360 - gmx:100777650 305.064