Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03627 ATGGCATTGAAGCTGCTACACGGGACTTTGACGGCAAACATTTCTCAGTTCCGAAATATCACGCCGCTTGTTCGCCGTATCGTGTCTCAGGAACGGGAGGCTGCCAGATTTGGTAACAGTGAACCTCGTAAACTCTATGCATCCATTTATCTGGATGAAGTAAAAATGAAAAGCAGGCATATACCAATAGAAGACTTCAAGAACATTGATAAATGGAATATGAAATTTAGCTTTCCTTGTGCGCATAATGCATCAAATGTCATTTTCAGCATTCATTGTGGCAAGGCCCCCAATGGTCGGCGAAATTCAATGTTAGAAGCAAAAGTGCCATGTGGGGAAATCATCAACAATAATGGTCAATATCAATCAGAAGTCCCTTTGATTGATCCTAATTCAGACACGAATGATGCAGAAATGCATGAGTCACTTCACATGAAGCTGAATTTTGATGAAGCTTTTAATAATTCGAAAATAGGCATCGAAAGGGCTTTCTTTCAAGAAGTTTCTGACAGTTACTATCCACTGAGAAATGGATGCAAAGTTACTCTTTATCAGGATGCTCATGTCCCAGATGATTATGTCAAGAAAATGGTCAATGCCGGACTGGTGAATTATGAGCCTCAGAGATGTTGGGAGGATATATTTGATGCAATCAATAAAGCAGAGCACTTCATATACATTGCTGGCTGGTCTTTTTACACTGACATAACATTGAGAAGGGATCCAAAGAGGCCAAAGGATGGGGGAGAACCAAAACTTGGAGAGCTGCTCAAGAGAAAGGCAAACGCTGGTGTCAAGGTCGTATTGCTTCTTTGGGAAAATAAAGCAAGAAGCCGGTGGAGGATTCTGTCACCAATACTTGACTTCTTTGGAGCCGTCAATACTCACGACAAAGAAACACAAGATTATTTTAAAAATACTGGTGTGCATTGTATTTTAAGTACTAGGAGCTTTACCTACACTCATCACCAGAAAATGGTGGTGTTGGACAAGGAGTTACCTAGTGGTGAGTCAAAGAAGAGGGGAATAACGAGTTTTCTTGGGGGTATTGATCTCTGTGATGGTAGATATGATACTCCATCTCATCCACTTTTTAGCACCTTGAATGAGCATAAAGAACATGGTATAGACTTTTATCAACCCAGCATTAAAGGCTCCAGAATTCAAAATGGTGGTCCAAGGCAACCCTGGCATGATGTGCACTGTCAGCTTGAAGGACCTGTTGCATTGGATGTTTACAAGACTTTTGTGCAAAGATGCGAGAAGGAAGGTAAACAGGATATACTTGTTCCAGAGTCTGCTATTAAAAGCCTCATCGATCAGACATCTTCAATAACAAACCATAGTGATGATCGTGAGACTTGGAATGTTCAGTTACTTCGATCTGTTGACAGCAGAGCTATTTCTGGGTTGTCAGAAACTGCTTACGGAAATGGGGATATCATAATAGACCGTAGCATTCAACATGCTTACATTGAAGCTATTCGGCGCTCAAAGAATTTCATCTACATTGAACATCAATATTTCATAGGAAGCTGTTTTGACTGGCGTGCAGGTAAGTTCAACCCTAAGCAACTTGGTTGTTTGCATCTAATTCCAAAGGAGCTATCACTTAAAATTGTTAGCAAGATTGAAGCTGGAGAAAGGTTCACTGTTTATGTTGTGCTTCCTATGTGGCCGGAGGGAAATCCACGTAGTCGTGTAGTTCAGCTGATGTTGGATTGCCAAAAGAGGACCATAGAAATGATGTACAATGATATTATTGGTGCACTCAAGAAAAAGAATCCTGCAGAAAGATTTGAAGAAATTAGAAAACATGCTCAGAGTTATTTGGCATTCTTCTGGCTTGGCAACCGGGAGGCAAAAACAGATGCTGAGCTTCAACCAATATCAAGTCCATACAGAAATTTTCATTACATGAATGCTCAAACTTCCAGGCGATTTATGATTTACGTGCACTCCAAGATGATGATAGTGGATGATGAATACATTATCAATGGATCTGCAAACATTAACCAGAGGTCAATGGACGGTGCTAGAGATACCGAGATCGCCATCGGAGCTTATCAACCCTTATATTTGGCTGCCAATCAAGATGGTGCACGGGGCCAGATTCATCATTTTCGCTTGTCATTGTGGTTCGAACATCTTGGCAGATATGAAGCCACTTTCCTCAACCCTGAAAGTGAAGATTGTATTAGCAGGGTGAATCAGCTTGCTCAAGACAATTGGAACGAGTATAAAGGAGAAACATTAGGCGCTGACCTTTCTGGCCACCTTCTGCGCTATCCCATTGATATTTCTCCTGATGGAAGTATCACACATGACACTGATGAAACATCTACATTCCCGGACACCGATGCCAGTATTCTAGGTAACCAAGCCTTAGATGATTTGCCTGACAACGATACGCTCCTAAAATTAGTGGAGAGGGTCTAG 2439 0.4137 MALKLLHGTLTANISQFRNITPLVRRIVSQEREAARFGNSEPRKLYASIYLDEVKMKSRHIPIEDFKNIDKWNMKFSFPCAHNASNVIFSIHCGKAPNGRRNSMLEAKVPCGEIINNNGQYQSEVPLIDPNSDTNDAEMHESLHMKLNFDEAFNNSKIGIERAFFQEVSDSYYPLRNGCKVTLYQDAHVPDDYVKKMVNAGLVNYEPQRCWEDIFDAINKAEHFIYIAGWSFYTDITLRRDPKRPKDGGEPKLGELLKRKANAGVKVVLLLWENKARSRWRILSPILDFFGAVNTHDKETQDYFKNTGVHCILSTRSFTYTHHQKMVVLDKELPSGESKKRGITSFLGGIDLCDGRYDTPSHPLFSTLNEHKEHGIDFYQPSIKGSRIQNGGPRQPWHDVHCQLEGPVALDVYKTFVQRCEKEGKQDILVPESAIKSLIDQTSSITNHSDDRETWNVQLLRSVDSRAISGLSETAYGNGDIIIDRSIQHAYIEAIRRSKNFIYIEHQYFIGSCFDWRAGKFNPKQLGCLHLIPKELSLKIVSKIEAGERFTVYVVLPMWPEGNPRSRVVQLMLDCQKRTIEMMYNDIIGALKKKNPAERFEEIRKHAQSYLAFFWLGNREAKTDAELQPISSPYRNFHYMNAQTSRRFMIYVHSKMMIVDDEYIINGSANINQRSMDGARDTEIAIGAYQPLYLAANQDGARGQIHHFRLSLWFEHLGRYEATFLNPESEDCISRVNQLAQDNWNEYKGETLGADLSGHLLRYPIDISPDGSITHDTDETSTFPDTDASILGNQALDDLPDNDTLLKLVERV 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03627 812 Gene3D Endonuclease Chain A 482 696 - -
Aip10g03627 812 SUPERFAMILY Phospholipase D/nuclease 160 429 - -
Aip10g03627 812 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 648 675 IPR001736 GO:0003824
Aip10g03627 812 Pfam Phospholipase D Active site motif 320 356 IPR001736 GO:0003824
Aip10g03627 812 SUPERFAMILY Phospholipase D/nuclease 440 732 - -
Aip10g03627 812 SMART pld_4 648 675 IPR001736 GO:0003824
Aip10g03627 812 SMART pld_4 318 356 IPR001736 GO:0003824
Aip10g03627 812 PANTHER PHOSPHOLIPASE D 4 796 IPR015679 -
Aip10g03627 812 PANTHER PHOSPHOLIPASE D ALPHA 3 4 796 - -
Aip10g03627 812 Pfam PLD-like domain 644 686 IPR025202 -
Aip10g03627 812 Pfam Phospholipase D C terminal 722 793 IPR024632 -
Aip10g03627 812 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 318 356 IPR001736 GO:0003824
Aip10g03627 812 Gene3D Endonuclease Chain A 193 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03627 Aip-Chr10 134500904 134505109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03627 1 800 Phospholipase D Gene Family (Wang group) AT3G15730 48.445 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03627 K01115 - sind:105158388 744.962