Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03608 ATGGGTTCGGATGAGCGGTTCGTGGTTCTTGTAGGTGTAGTTCTTGTTTTATCATTGATGCCGTTTTCTATGTCAGACGATGCGGCTGTCATGAAGGCTCTGAGGGGTTCGATAACGTCACCCGGTCTGAACTGGACGAGTGCTGACGTGTGCAGTTGGAGTAACGTACGTTGCGATAACGGTCCGGGGAGAGTAACCGCCATACAAATCGCAAACCTCAACCTGGCGGGCACTCTTCCCAAGGATCTCGGGCAGCTCGGTCAGCTTCAGCATTTCGACTGCAGAGCGAACAACTTCACCGGTGCATTTCCTCACTTGGCTACCACCCTGCAGACGCTGAACATCAACAACAACGGATTCACGTCGTTCCCTGAAGATTTCTTTGAAGGCATGAGTAGCTTGCAAGTTGTTAGCATCGGTTCTAATTCTTTCTCGCAGTGGAAAGTTCCAGAAAGTCTCAAAGACTGTGTTTCGTTGACGAGCTTCTCCGCGATCGGCGCCAACTTTTCCGGCAAGATTCCTGAATTCTTCGGGAGCAGTGGTCCGTTCGGCAGTTTGCAGAATCTTTCTTTGAGTTTCAATAACTTCGACGGCGGTTTGCCTGATTCGTTTTCCGGAAGCGGAATACAGAATCTGTGGGTGAATGTTCTTCCAGGTAACAACAAACTCAGCGGAACTCTTTCAGTTTTACAGAATATGACTTCGCTTAGGCAAATTTGGGTTCATGGAAACAATTTCACTGGTCCTATACCTGATTTTTCGAACCATGATTCTCTTTATGATGTGAGTTTGAGGGATAATAAGCTAACAGGTGTAGTACCGGAATCTCTTGTTAATCTTCCATCGCTTAAGGTAGTTAATTTGACTAATAATCGTCTTCAAGGTCCTCCTCCCAAGTTTAGGGACGGGGTTAGGGTTGATGATGTCATTAATCAGGGGAATCAGTTCTGCACCAACGTGATAGGTGGGAAGTGTAGTGAAATTGTTGATATTTTGCTGAAAGTGGTTGAGCCTTTGGGTTATCCTCTAATGCTTGCTGAGAGTTGGAGTGGCAATGATCCTTGTGGTGGTAATGGCTGGATGGGGATTGATTGTGACGGTGGAATTGTTAGGGGGATAAATTTTCAAAACAAGGGCTTCTCTGGGACTATATCTCCTAGTTTTGCCAAGCTTACTAATGTGACAAGGTTGCTTCTTAATAATAACCGTCTCACTGGTACCATACCTGAGGAACTTACCAGTATGCCTAATTTGATGGTGCTGGATGTCTCCAATAACCAATTGTATGGAAAGGTTCCGAAGTTTCGCGAAGGCGTGAAGGTTAACACCGGTGGGAATCCTGATATTGGAAAGGATAAGCCAAGTGGAGGAGGTGGTAGTTCTTCGGGAGGTATAAGTGGTCATACTGGAGTCATTGTTGGTGTTGTGGTGGGGATTCTTGTTTTACTTGTTGCTGGGTTATTGCTGTATAAGTATTGTGGGAAGAATAAGGGTGGTGGTAATGCTCAACCACCAAATAATGCTATCGTCGTACATCCTCGCCGTTCCGGAGAAGGAGATGCTCTGAAGATAAGTGTTGCGGATGCTGCTGCTGCTTCAGCTTCAGCTTCTGCCAGTAGTCCAAAAAGTGATGTTCATCATGTGGAAGCAAGCAATTTTGTAATCTCCATTCAAGTCTTGAGACAAGTGACGAACAATTTTAGCCAAGAGAATATATTGGGGAAAGGTGGTTTTGGCACTGTGTACAAAGGAGAGTTGCCTGATGGAACCCAGATAGCGGTGAAGAGAATGGAGTCTGGAGTGGTGGGTGAGGGTGAGAAGGGGCTAACCGAGTTCAACTCAGAAATTGCAGTGCTTACTAAGGTTAGACACAGGCATTTGGTAGAACTCATTGGCCATTGCTTGGATGGACATGAGGGGCTTCTTGTCTATGAATACATGCCTCAGGGACCGCTTAGCAGGCATTTGTTTGATTGGAAGGATGAAGGGATAAAGCCTTTGGAGTGGAAGCAAAGGCTTATTATAGCTTTGGATGTTGCTAGAGGTGTTGAATACCTTCATAATTTGGCACAACAGATCTTCATCCATAGGGATTTGAAGCCATCAAACATCTTGCTTGGGCATGATTTGCGAGCTAAAGTTTCGGATTTCGGATTGGTCCGGCTTGCCCCTGAAGGACAGACATCGTTCGAGACTAGACTTGCCGGAACTTTTGGATACCTAGCTCCGGAGTATGCTGTAACCGGACGAGTTACAACAAAGGTTGATGTATATAGCTTTGGGGTGGTTCTTATGGAGATGATAACTGGAAGGAAAGCTATAGATAACAGCCAGCAGGAAGAGAACATCCACCTAGTTACATGGTTCCGGAGGATGCTGCTGAACAAAGATTCGTTTCGGAAGGCCATCGACCCAGCAATTGATACTGTGGATGAAGAAACCTTAGCCAGTGTTATCACTGTTGCAGACTTGGCTGGCCACTGCTGCGCAAGGGAGCCGTATCAGCGGCCGGATATGGGCCATGTGGTGAACGTGTTAGCGCCTCTTGTTGAGGTGTGGAAGCCGACGGAACAAAGGGGCGAAGACACGTTTGCCATAAATTTTGACGAGAGTTTGCCAGAAGCATTGAGCAAGTGGCAGGCCTATGAAGGAACAAGCACCATGGATATCTCATCTTCATCTACATCAATGCTTACCAGCCGAGACAATACACAATCAAGCATACCTAATCGCCCTGTTGGATTTGCAGAAACCTTTACATCTTACGATGGACGATAA 2778 0.4626 MGSDERFVVLVGVVLVLSLMPFSMSDDAAVMKALRGSITSPGLNWTSADVCSWSNVRCDNGPGRVTAIQIANLNLAGTLPKDLGQLGQLQHFDCRANNFTGAFPHLATTLQTLNINNNGFTSFPEDFFEGMSSLQVVSIGSNSFSQWKVPESLKDCVSLTSFSAIGANFSGKIPEFFGSSGPFGSLQNLSLSFNNFDGGLPDSFSGSGIQNLWVNVLPGNNKLSGTLSVLQNMTSLRQIWVHGNNFTGPIPDFSNHDSLYDVSLRDNKLTGVVPESLVNLPSLKVVNLTNNRLQGPPPKFRDGVRVDDVINQGNQFCTNVIGGKCSEIVDILLKVVEPLGYPLMLAESWSGNDPCGGNGWMGIDCDGGIVRGINFQNKGFSGTISPSFAKLTNVTRLLLNNNRLTGTIPEELTSMPNLMVLDVSNNQLYGKVPKFREGVKVNTGGNPDIGKDKPSGGGGSSSGGISGHTGVIVGVVVGILVLLVAGLLLYKYCGKNKGGGNAQPPNNAIVVHPRRSGEGDALKISVADAAAASASASASSPKSDVHHVEASNFVISIQVLRQVTNNFSQENILGKGGFGTVYKGELPDGTQIAVKRMESGVVGEGEKGLTEFNSEIAVLTKVRHRHLVELIGHCLDGHEGLLVYEYMPQGPLSRHLFDWKDEGIKPLEWKQRLIIALDVARGVEYLHNLAQQIFIHRDLKPSNILLGHDLRAKVSDFGLVRLAPEGQTSFETRLAGTFGYLAPEYAVTGRVTTKVDVYSFGVVLMEMITGRKAIDNSQQEENIHLVTWFRRMLLNKDSFRKAIDPAIDTVDEETLASVITVADLAGHCCAREPYQRPDMGHVVNVLAPLVEVWKPTEQRGEDTFAINFDESLPEALSKWQAYEGTSTMDISSSSTSMLTSRDNTQSSIPNRPVGFAETFTSYDGR 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03608 925 SMART LRR_typ_2 108 130 IPR003591 -
Aip10g03608 925 SMART LRR_typ_2 391 415 IPR003591 -
Aip10g03608 925 SMART LRR_typ_2 183 206 IPR003591 -
Aip10g03608 925 SMART LRR_typ_2 280 302 IPR003591 -
Aip10g03608 925 Gene3D Phosphorylase Kinase; domain 1 527 646 - -
Aip10g03608 925 Gene3D Ribonuclease Inhibitor 328 453 IPR032675 -
Aip10g03608 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Aip10g03608 925 Gene3D Transferase(Phosphotransferase) domain 1 647 871 - -
Aip10g03608 925 Pfam Leucine rich repeat N-terminal domain 346 366 IPR013210 -
Aip10g03608 925 Pfam Leucine rich repeat N-terminal domain 25 59 IPR013210 -
Aip10g03608 925 ProSitePatterns Protein kinases ATP-binding region signature. 573 595 IPR017441 GO:0005524
Aip10g03608 925 CDD STKc_IRAK 573 849 - -
Aip10g03608 925 PANTHER OSJNBA0070M12.3 PROTEIN 9 925 - -
Aip10g03608 925 SUPERFAMILY Protein kinase-like (PK-like) 546 846 IPR011009 -
Aip10g03608 925 MobiDBLite consensus disorder prediction 890 914 - -
Aip10g03608 925 Pfam Leucine rich repeat 109 161 IPR001611 GO:0005515
Aip10g03608 925 Gene3D Ribonuclease Inhibitor 25 323 IPR032675 -
Aip10g03608 925 SUPERFAMILY L domain-like 38 433 - -
Aip10g03608 925 SMART serkin_6 567 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03608 925 MobiDBLite consensus disorder prediction 890 925 - -
Aip10g03608 925 MobiDBLite consensus disorder prediction 439 462 - -
Aip10g03608 925 Pfam Protein kinase domain 568 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03608 925 ProSiteProfiles Protein kinase domain profile. 567 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03608 925 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 9 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03608 Aip-Chr10 134366314 134370115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03608 65 846 Receptor kinase-like Gene Family AT5G07280 30.241 3.38e-87 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aip10g03608 Pkinase 6.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03608 - K00924 adu:107472017 1706.03