Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03606 ATGTCTCTAACCACATTCTCTTCCTCCTCCTCCTTCTTCTTCTTCTTCATCATCAATTTCATCTTCCTCTTCAATCTTCACCCTTCAATTGCACAAAGCCAAAACCAACGAGTAACCTTCTCTTCATTCAACAGCTCAGACTCTCCATGGAGTCCAACTCAGAACAAATTCCTTATCTCACCAAACAGAAACTTCACTGCTGGCTTCTTCCCCCTTCCGAATTCCCCAAACCACTTCACCTTCTCCGTTTCGTTCGCCAAAGTTCCCCAATCTTCAAACCCTATCGTTTGGAACGCCACATCCACCAACCTCACCTCCAAATCTTCGCTTCAAATCACCACCAATAATCAAATCCTCCTCAACGGTCTCCCATTATTTGTTAACCCTAACCGCTCATCTTCTTCCCAATCGAACAACGCATCAACGATTCAACTCGTTCTCACCGACGACGGAAACTTGAAATTCGGAGATTCGAACAGCTTCGATGACGCTACCAACACTATCCTTCCCAATCAAGACGTCAACTCAACCGAGCTTGTATCTAACAACGGGAGATTCAAGTTCCGGAAACTGGTGCTCGATGACGATGGGAATCTAAAGATCTATAGCTTCTATCCTGAAGAGAATAATCAGTGGAAGGTTGTGTGGAGAGCGATATGGGAAATGTGCCATGTCAAAGGAAGGTGCGGTTCTTATGCTATTTGCGTAACAAGTGATGGTTTGAACGTGACTACCACTTCTTGTGTTTGCCCCACCGGGTTCGCCGCAAACAACGGTGTTCCCGACCGTGGCTGCACACGGAAGAAACCACTCTCCAAGAACACCGGCTTCATCAGGCTCGATTACGTGAACTACACAGTCTCCGGCGACGGCAGCACCATGAACCAGTTAAGCGGCTCCCAGAATTTCTCTGTCTGCGAAGCCACCTGCAAAACAAACCCCAACTGCTTGGGATTCGGATTCAAGTACGACGGATCAGGTTTCTGCGTTCCGCTAATCGGTAAAGAGCTTCAATACGGTTACTGGTCACCGGGCACCGAGACCGCGTTGTTCATCAAAGTAGATGAATCAGAATCAGAAGAAAGCTCCAATTTCGTTGGGCTGACGGAGGTTATGCAAACGAGTTGCCCGGTGAGGATAAGCCTGCCGCTGCCACCGAAGGACTCGAACGCCACCACGAGGAACATCATCATAATCTGCACGCTATTTGCGGCAGAGCTTATTTCTGGTGTGGCTTTCTTCTGGTCTTTCTTAAAGAGATACATCAAATACAGGGACATGGCCACTACTTTAGGCCTTGAACTCTTACCTGCTGGTGGCCCCAAAAGGTTCACTTACTCTGAGCTCAAGGCCGCAACCAATGATTTTTCCAACCTCATTGGAAGAGGTGGATTTGGGGCGGTTTACCGAGGCGAGTTGCCAGACCACCGCGTCGTCGCTGTCAAAGTCTTGAAAAACGTTTCAGGTGGCGACGCGGAGTTCTGGGCCGAGGTGACCATCATTGCCAGAATGCACCACCTCAATTTGGTTCGACTATGGGGATTCTGTGCGGAGAAAGGACAAAGAATTCTCGTGTACGAGTACATCCCTGGTGGCTCATTGGACAAGTACCTCTTCAGGTTGAACAATTCTAAAAAAGGCGACTCAAATACACAGCAAGAGAAGCCTATTTTGGATTGGAATATGAGGTATAGAATTGCTCTTGGTGTAGCCAGATCTATTGCATATTTGCATGAAGAGTGTTTGGAATGGGTTCTACACTGCGACATCAAACCCGAAAATATTCTTCTAGGCGATGACTTTTGTCCTAAGATATCGGATTTTGGACTCGCTAAGTTAAGGAAAAAAGAGGATATGGTAACAATGTCCAAGAGGAGGGGTACTCCGGGATACATGGCTCCTGAATGGATTACTGCGGATCCAATAACATCAAAGGCTGATGTATATAGTTTCGGAATGGTGTTGTTGGAGCTTGTGAGTGGAGTTAGAAACTTTGAGAGTCCTGAGTCTATGGTTAGAAGTGATGAGTGGTACTTTCCAGGTTGGGCTTTCGATAAGATGTTCAAGGAAATGAGGGTCGAGGACATTCTTGATGGTCATATTAGGGAAATGTATGATACAAGGGCCCATTTTGAAATGGTTAATAGGATGGTGAAGACTGCTATGTGGTGCCTTCAGGATAGGCCTGAGTTGAGGCCTACAATGGGGAAAGTGGCTAAGATGTTGGAAGGAACTGTGGAGATTACTGATCCCAAGAAGCCCACCGTGTTCTTCCTTGGGGAAGAGTAG 2289 0.4696 MSLTTFSSSSSFFFFFIINFIFLFNLHPSIAQSQNQRVTFSSFNSSDSPWSPTQNKFLISPNRNFTAGFFPLPNSPNHFTFSVSFAKVPQSSNPIVWNATSTNLTSKSSLQITTNNQILLNGLPLFVNPNRSSSSQSNNASTIQLVLTDDGNLKFGDSNSFDDATNTILPNQDVNSTELVSNNGRFKFRKLVLDDDGNLKIYSFYPEENNQWKVVWRAIWEMCHVKGRCGSYAICVTSDGLNVTTTSCVCPTGFAANNGVPDRGCTRKKPLSKNTGFIRLDYVNYTVSGDGSTMNQLSGSQNFSVCEATCKTNPNCLGFGFKYDGSGFCVPLIGKELQYGYWSPGTETALFIKVDESESEESSNFVGLTEVMQTSCPVRISLPLPPKDSNATTRNIIIICTLFAAELISGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSELKAATNDFSNLIGRGGFGAVYRGELPDHRVVAVKVLKNVSGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYIPGGSLDKYLFRLNNSKKGDSNTQQEKPILDWNMRYRIALGVARSIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSKRRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGVRNFESPESMVRSDEWYFPGWAFDKMFKEMRVEDILDGHIREMYDTRAHFEMVNRMVKTAMWCLQDRPELRPTMGKVAKMLEGTVEITDPKKPTVFFLGEE 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03606 762 Pfam Protein kinase domain 458 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03606 762 Gene3D Phosphorylase Kinase; domain 1 428 528 - -
Aip10g03606 762 SUPERFAMILY Protein kinase-like (PK-like) 436 743 IPR011009 -
Aip10g03606 762 PANTHER OS07G0415500 PROTEIN 187 762 - -
Aip10g03606 762 PANTHER OS10G0101000 PROTEIN 14 189 - -
Aip10g03606 762 CDD STKc_IRAK 460 744 - -
Aip10g03606 762 ProSitePatterns Protein kinases ATP-binding region signature. 460 482 IPR017441 GO:0005524
Aip10g03606 762 PANTHER OS10G0101000 PROTEIN 187 762 - -
Aip10g03606 762 Pfam S-locus glycoprotein domain 182 257 IPR000858 GO:0048544
Aip10g03606 762 Gene3D Transferase(Phosphotransferase) domain 1 529 754 - -
Aip10g03606 762 PIRSF SRK 176 762 IPR024171 GO:0004674
Aip10g03606 762 PIRSF SRK 9 187 IPR024171 GO:0004674
Aip10g03606 762 SMART serkin_6 454 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03606 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Aip10g03606 762 ProSiteProfiles Protein kinase domain profile. 454 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03606 762 PANTHER OS07G0415500 PROTEIN 14 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03606 Aip-Chr10 134348002 134351149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03606 442 745 Receptor kinase-like Gene Family AT4G18250 41.100 5.20e-77 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip10g03606 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03606 - - ahf:112783437 1493.02