Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03605 ATGACAACCACACTCAGAAGATCGAAGCGTAAGCATAATCTTGAGCCAGCACCAAAAATCACTGGAAAGAAGCTTCGGTCAAACCTCCCTCGCCGGCGACGGTGCCAGATCTCACCGGTGGTTATTGTTTCCACTAGATTCAATGCTTCCAGAGAAAATCCTTGTTTCTCCGGAAAATCAATGGATTCTGATTCTTGCTCTGACGACTTTGCCGGCGGCGAAGCTTCGTGTAACTCGAGCAGAGCTTCCGCTGTTTTCGCCGGAAATGGAGGTTGCTCCAAATCGAGCGAGAAATTGCAATGCGAAATATCGAGAAATCGAAGATTCGGGAAGCAAAATGAAAGTGAAGTGTCGGAGTCTTCGTGTGTGGACTCCAATGACAGAGTTCGCGAACGGAGCAGGAGCTTGATTCTGAAGTTCAGAAGTGAAAAGGAGAGACGAAACGATGAATTCTCCGAAGCATGCACGAAATCTGAGATCACTTGCGAGGATGCAAAGTCCGGTAACCGAAATTTGAAAGCGTCGTCGGAAACGAAGAACAATCACGACGTCATAAACAGAGAATCGGAATTAGAATTCTCTCAAGGTTCGAGAAACCACCGCGAGGATGATAGTAACTGTGTTGATTTGATAGCAAAATCGAAGATCAATCAAAGTACGAATAGCTCCGATCTCAATTGCACGGAGCAATTGCGATTCTCATATTCCAACGAAGACGAAGATGACGAAGACGATGAGTCAGAGTACTATTCGAGTCAGGGAACTGTGCTCTCCGATCTTCGCTCAGAGATGTTCAGCTTCCCTGAGTGTTCAGAACTTGAGCTTTCTGATTACACTCCGTCGCTATTCATTGATTCAGGAAGCCAATTCTCGCAGGGATCCGTTGGTGAAACTCCTTCTCCAACTCACTCGTTATTTCTTCAGTTCCGTAACGAGTTCACCACGCTAATTATAACTTCTCCATTCAACAATAATTCTTCCAGCGTCAAAGATGAGGTCTTTGTGAAGTTCGATGATTTGGACGAAGAAGAAAGCTACCTGATGCTGAGAGAGAGGGAGAGGAAGCAAGTTCTTCTGTGGAATTATACAGATAGCTATTTTTCTACCACTGAATTCGGGGACCTCGTGATTCAGCAACGCTCTCAAATGGTACACTGGATCGTTGAGCAATCTTATCGAAAACAGCTTCGGCAAGAGACGATGTTTCTTGGAGTCAGCCTCCTTGACCGTTTCTTAAGCAAAGGATATTTTAAAGTCAAGAGAAACCTTCAGATTGTTGGGATCGCTTGCCTCACGTTAGCCACGAGGATCGAAGAAAACCAGCAATATAGCAGAGTGGAGCAAAAGAATTTTTATATTGGAAGTAATGTGTACAGTAGATGCGAGGTGGTTGCTATGGAATGGGTGGTGCAGGAAGTGCTTAAGTTCCAGTGTTTCATTCCGACCATCTACAACTTCTTGTGGTTCTACTTAAAAGCTGCTAAAGTTAATGCAGCTGTGGAGAGGAGGGTCAAGTCGCTGGCAGTTCTGGTACTATCAGCTGAGGAGCAGCTATGCTACTGGCCCTCAACAGTTGCTGCAGCAATTGTAATCCTGGCTTGTCTCGAAGTGGATCAAAATGCCTTCCACAGAGTCATAGGGGTAATCACTATTGCTACAGAACTCTAG 1668 0.4526 MTTTLRRSKRKHNLEPAPKITGKKLRSNLPRRRRCQISPVVIVSTRFNASRENPCFSGKSMDSDSCSDDFAGGEASCNSSRASAVFAGNGGCSKSSEKLQCEISRNRRFGKQNESEVSESSCVDSNDRVRERSRSLILKFRSEKERRNDEFSEACTKSEITCEDAKSGNRNLKASSETKNNHDVINRESELEFSQGSRNHREDDSNCVDLIAKSKINQSTNSSDLNCTEQLRFSYSNEDEDDEDDESEYYSSQGTVLSDLRSEMFSFPECSELELSDYTPSLFIDSGSQFSQGSVGETPSPTHSLFLQFRNEFTTLIITSPFNNNSSSVKDEVFVKFDDLDEEESYLMLRERERKQVLLWNYTDSYFSTTEFGDLVIQQRSQMVHWIVEQSYRKQLRQETMFLGVSLLDRFLSKGYFKVKRNLQIVGIACLTLATRIEENQQYSRVEQKNFYIGSNVYSRCEVVAMEWVVQEVLKFQCFIPTIYNFLWFYLKAAKVNAAVERRVKSLAVLVLSAEEQLCYWPSTVAAAIVILACLEVDQNAFHRVIGVITIATEL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03605 555 MobiDBLite consensus disorder prediction 176 204 - -
Aip10g03605 555 Pfam Cyclin, C-terminal domain 481 540 IPR004367 -
Aip10g03605 555 CDD CYCLIN 480 534 IPR013763 -
Aip10g03605 555 Pfam Cyclin, N-terminal domain 375 477 IPR006671 -
Aip10g03605 555 SUPERFAMILY Cyclin-like 340 477 IPR036915 -
Aip10g03605 555 CDD CYCLIN 380 467 IPR013763 -
Aip10g03605 555 SUPERFAMILY Cyclin-like 480 540 IPR036915 -
Aip10g03605 555 PANTHER CYCLINS 1 553 IPR039361 -
Aip10g03605 555 SMART cyclin_7 385 472 IPR013763 -
Aip10g03605 555 Gene3D - 473 552 - -
Aip10g03605 555 MobiDBLite consensus disorder prediction 166 204 - -
Aip10g03605 555 ProSitePatterns Cyclins signature. 380 411 IPR006671 -
Aip10g03605 555 PANTHER CYCLIN-SDS 1 553 - -
Aip10g03605 555 MobiDBLite consensus disorder prediction 1 22 - -
Aip10g03605 555 Gene3D - 359 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03605 Aip-Chr10 134342228 134347047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03605 374 540 Core Cell Cycle Gene Families AT5G25380 34.884 1.41e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03605 K21777 - gmx:100817658 595.89