Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03573 ATGGCCAATGTGCTTTTGGAGAAAGGGAGGATCAACACAGTGCACGTGCTTTTGGAGAAAGGGATTGATTTGAATGCAGAGGATGAAGAAGGAAAGGTGCTGATGTTGAAGCCAGGAGTAAGAAGGGTCAATTCTGTCGGTGCTAAGGTGTTAGAATTTATAGCTCATTTTGGAAAGCCTACTGCACCGCTTCCTGCAGCTATTGTTGGTTGTGTTCCAACAAAAGCAGGCGAAACAGAATTCAAGATTTCTCCAACTGAAATTACAGATGCTATGAAAGCAGGATTGGATCAGCCTATAATGCCAGAGCCTGAGGATGAAGAACATGAAAACAAAGGAAAAGATGAGAGCTGTGATGTGAAGCTGCTGAAAGCGAGGAGAAGGTTGAGAGAGATTGGGAAGCTGATAAGAGAAGTGAGGAAAGAAAGAAGCAAGCGACAGCCATCCTTGAGGTCCATGATGGGGGAGAACATGCTCGAATTGAAGAAGAGGAACTTCCGCTATCACAAGCTATGTTACAGTGAAGAGGCTGAAGGTCATCATAATATGATATCTGCTTGCCCTGACGGTCCAATATATCAAAATGATGCGGCCGGACCCAGCAATATGGGGGAAGGTTTGCCACGTTTAAATGAGGCTGTTGTTGGTATCAGTAACAGTGGTCTTGAAACTTGCATTAAAGAAATATATGAAAAGTTTGATGAATTAAGCATATTGGAAGAACTACGAGTTGTTAATGGTCAAAATTACCGAACTGTTAGAGATAGAATCCTTCCATTTAGCAAAATTGTTGTCAATTCTTTGGGACATGGCAACTTCTCTACAATTCAATCTGCCATTGATTCTGTCTCTTCCAACAATAAGTATTGGGTTTTAATCAATGTCGAGGCTGGTATTTATAGGGAGAAAGTGACGATTCCAAGTGATAAACCATATATAATACTGAAGGGAAGTGGAAAGATGAGAACGTGGGTTGAATGGGATGACCATAATACAACTGCTCAGAGCCCCACCTTCCAATCCAATGCTGATAATATCGTTAATACATATAACAATCCAATAAATACAAATCCCAGAGTTCCTGCAGTAGCTGCAATGATAAATGGAGACAAATCTTACTTTTATAGAGTTGGATTCTTCGGATTGCAAGATACTTTGTGGGATAATTATGGAAAACATTATTATAAACTTTGCACTATTCAAGGTGCTGTTGATTTTATCGGCCAGTCATTATTTGAGAGGTGTGGCATAAATGTGATTGGAAGGGCATTAGGAGAAGGATTTGTAGGATATATAACAGCACAAGGGAGAGAAAATCCTAAAGATTCAAATGGATTTGTATTCAAAAATTGTAATGTCTTTGGAGATGGTTCTACTTTTTTGGGAAGACCTTGGAGACCTTATGCCAGAGTTCTTTTCTACAATACAAGTATGGCCAACATTATTCAACCCGCTGGTTGGGATCCATGGGATTCCTCTCAACATGACCTCTATACACAAACAAAAAAGTTTCAAAGCGAAGGAGAAACAACAAAAAGGAACAGGAGAAAGCAAAACCCTAATTTTCACTTACTCCGCCGCGCCGGGGAATCGTCGTCGTCGTTGTTGTCATCGACCTCTCCTTTTGCGTGGTTATTGAATTCTCCAATTCTGAGCTTGGAATTTGATTAG 1671 0.4039 MANVLLEKGRINTVHVLLEKGIDLNAEDEEGKVLMLKPGVRRVNSVGAKVLEFIAHFGKPTAPLPAAIVGCVPTKAGETEFKISPTEITDAMKAGLDQPIMPEPEDEEHENKGKDESCDVKLLKARRRLREIGKLIREVRKERSKRQPSLRSMMGENMLELKKRNFRYHKLCYSEEAEGHHNMISACPDGPIYQNDAAGPSNMGEGLPRLNEAVVGISNSGLETCIKEIYEKFDELSILEELRVVNGQNYRTVRDRILPFSKIVVNSLGHGNFSTIQSAIDSVSSNNKYWVLINVEAGIYREKVTIPSDKPYIILKGSGKMRTWVEWDDHNTTAQSPTFQSNADNIVNTYNNPINTNPRVPAVAAMINGDKSYFYRVGFFGLQDTLWDNYGKHYYKLCTIQGAVDFIGQSLFERCGINVIGRALGEGFVGYITAQGRENPKDSNGFVFKNCNVFGDGSTFLGRPWRPYARVLFYNTSMANIIQPAGWDPWDSSQHDLYTQTKKFQSEGETTKRNRRKQNPNFHLLRRAGESSSSLLSSTSPFAWLLNSPILSLEFD 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03573 556 Pfam Pectinesterase 263 525 IPR000070 GO:0030599|GO:0042545
Aip10g03573 556 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 250 516 - -
Aip10g03573 556 Gene3D - 260 541 IPR012334 -
Aip10g03573 556 PANTHER PECTINESTERASE 10-RELATED 250 516 - -
Aip10g03573 556 SUPERFAMILY Pectin lyase-like 263 499 IPR011050 -
Aip10g03573 556 Coils Coil 122 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03573 Aip-Chr10 134127832 134139530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03573 263 492 Carbohydrate Esterase AT2G19150 45.228 3.17e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03573 - - ahf:112786588 494.197