Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03554 ATGGAAGAGGGAAAGGGTAGAGTGTGTGTAACTGGAGGCACAGGTTTTCTTGGTTCATGGATCATCAAAAGGCTCCTTCAAGATGGTTACTCTGTTAACACCACCATCAGATCTGATCCCAAGAGAAAAAGGGACATTAGCTTCCTCACAAATCTGCCTGGTGCATCCCAAAAATTGAAAATATTCAATGCTGACCTCAGCAATCCAGAGAGTTTCACTGAAGCAATTGAGGGGTGTTTTGGGGTTTTCCACACAGCTACACCAATTGACCTTTTAGTAACTGAACCGGAAGAGTTAGTTACAAAAAGGACAATTGATGGAGCACTGGGAATCCTGAAAGCATGCTCTGATTCAAAGACAGTTAGAAGAGTAGGCGAAGTGGAGGCAGTGGATGAGAGTAGTTGGAGCAATGTGGAATATCTTAGAAATATGAAACCATATGGTTGGTCTTATGGAGTTGCGAAGACATTAACAGAGAAGGCAGTGCTTCAATTTGGTGAAGAGAATGGTTTGGAAGTCGTCACTCTAATTCCTCCTTTTGTTGTTGGATCTTTCATTTGTCCTAAGCTTCCTGATTCTGTTGAGAAAGCATTGCTTTTGCTATTAGGGAAGAAGGATGAAATTGGTGTTACACGTATGCATATGGCACATGTTGATGACGTGGCAAGAGCTCATATATTCCTGCTTGAGCATCCTAATCCAAAAGGCAGATATAATTGTTCTCCATTCATTGTATCTATTCAACAAATTTCTCAACTTCTTTCTGCCAAGTATCCACAATTTCAAATACCAACTTTAGATGAGGTGAGAGAAATTAAAGGAGTGAAGCAACCAGAATTGATCTCAAAGAAGCTCACAGATGCTGGATTTGTGTTCAAGTATAGCTTGGAGGAAATGTTTGAAGATGCAATTGAATGCTGCAAGGAGAAGGGTTTTCTttga 942 0.4045 MEEGKGRVCVTGGTGFLGSWIIKRLLQDGYSVNTTIRSDPKRKRDISFLTNLPGASQKLKIFNADLSNPESFTEAIEGCFGVFHTATPIDLLVTEPEELVTKRTIDGALGILKACSDSKTVRRVGEVEAVDESSWSNVEYLRNMKPYGWSYGVAKTLTEKAVLQFGEENGLEVVTLIPPFVVGSFICPKLPDSVEKALLLLLGKKDEIGVTRMHMAHVDDVARAHIFLLEHPNPKGRYNCSPFIVSIQQISQLLSAKYPQFQIPTLDEVREIKGVKQPELISKKLTDAGFVFKYSLEEMFEDAIECCKEKGFL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03554 313 CDD FR_SDR_e 8 290 - -
Aip10g03554 313 Pfam NAD dependent epimerase/dehydratase family 8 239 IPR001509 -
Aip10g03554 313 PANTHER DIHYDROFLAVONOL 4-REDUCTASE-LIKE PROTEIN 1 305 - -
Aip10g03554 313 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 305 - -
Aip10g03554 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 308 IPR036291 -
Aip10g03554 313 Gene3D - 5 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03554 Aip-Chr10 133926496 133930072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03554 4 313 Monolignol Biosynthesis Gene Families AT2G02400 33.129 4.36e-55 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03554 - K13265 gmx:100194416 502.286