Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03551 ATGAAAATCCCTTGCTGTTCGGTTTGCCAAACGCGGTATAACGAGGAGGAGCGAGTACCGCTGCTGCTCCAATGTGGACACGGATTCTGCAAAGAGTGCCTTTCTAGAATGTTCTCTTCATCGCCCGACGCAACGCTCACATGTCCACGATGCCGCCACGTGTCAACCGTCGGGAACTCCGTACAGGCTCTGCGAAAGAATTACGCTGTTTTGGCACTCATCCACTCCGCCGCCGCCGGAGCTGGAGGCGCCGCTGCTGGTGTTGAGATGTGGACGGCGGTGATCGGAGGAAGCGGAGGACGGTGCCGGCACCAGGTGGCGGTTAAGAAGGTGGCGGTGACGGAGGGGATGGATTTGGAGTGGATTCAGGGGAATCTCGAGAATTTGCGGAGAGCTTCGATGTGGTGCAGGAACGTGTGCACTTTCCATGGAGCAATGAAGCATGAAGAGAGCTTGTGCCTTGTGATGGATAGGTGCTATGGATCGGTTCAGTCTGAGATGCAGAGAAATGAGGGCAGGCTCACTTTGGAACAAGTCCTAAGATATGGAGCAGACATTGCAAGAGGGGTTGTTGAGCTTCATGCTGCTGGTGTCGTTTGCATGAATTTAAAACCTTCCAATCTTCTTCTTGATTCAAATGGGCACGCGGTAGTTTCTGATTATGGACTTGCTACAATTTTAAAGAAGCCTTCCTGTTGGAAGGCGCGGCCAGAGTGTGACTCCTCAAAGATCCACTCTTGTATGGAATGTATAATGCTCAGTCCACATTATACAGCACCCGAGGCTTGGGAACCTGGGAAGAAGTCACTAAATATTTTCTGGGATGATGCAATAGGTATATCTCCCGAGTCAGATGCATGGAGTTTTGGTTGTACATTGGTTGAGATGTGCACGGGTGCCATTCCTTGGGCTGGCTTAAGTGCAGAAGAAATTTATCGTTCAGTTGTTAAAGCCAAGAGACTTCCTCCACAGTATGCCAGTGTGGTTGGTGGTGGAATTCCAAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAATTCAAGCCATCTAAAAGGCCTACATTTAATGCAATGTTAGCAATATTTCTCCGCCATTTGCAGGAAATACCGCGCAGCCCTCCTGCAAGCCCTGATAATGACTTTGTCAAACGCTCTGTGTCTAATGTTACTGAACCAACCCCAGCCCCTGAATTAGATGTCCCTCAAGAAATGCCAAACCCAAACCATCTTCACCGCTTTGTGTCTGAAGGGGATGCCACAGGAGTTAGAGATCTTCTTGCGAAGGCTGCATCAGAAAATGGCAGCGATTACATATCTTCTCTACTGGAATCTCAAAATGTTGATGGGCAAACAGCTCTTCACTTAGCTTGTAGGCGTGGAAGTGCAGAGCTTGTTGAGGCCATTTTGGAGTATAAAGAGGCTAATGTTGATGTCTTGGACAAAGATGGAGATCCTCCTCTTGTTTTTGCTTTAGCAGCTGGCTCTCCAGATTGTGTTCGTTGCCTCATCAAAAGAAATGCTAACGTGACATCAAGACTGAGGGATGGCTTGGGCCCATCTGTCGCTCATGTTTGTGCTTATCATGGACAACCAGATTGTATGCGAGAACTACTATTAGCTGGAGCTGATCCTAATGCAGTGGATGATGAAGGAGAATCTGTATTGCATAGGGCAGTTGCTAAGAAGTATACAGACTGTGCCATTGTAATATTAGAAAATGGAGGCTGTAGATCAATGGCCATTATGAACTCAAAGAACCTGACACCGCTACACTTGTGTGTGGCAACATGGAATGTTGCTGTTGTGAAGAGATGGGTGGAAGTTGCAACTTCAGATGAGATTGCTGAAGCAATTGACATACCGAGCCCAATTGGAACTGCCTTGTGCATGGCAGCAGCTTCTAAGAAAGATCATGAAAGCGAAGGGAGAGAATTGGTGCGGATACTGCTTGCGGCAGGAGCGGATCCGTCTGCTCAAGATTCACAGAATGGGAGGACAGCTTTGCATACAGCTGCTATGACAAATGATGTGGACTTGGTCAAGGTCATTCTTGCTGCTGGAGTTGATGTGAACATTTGCAATATACACAACAGTATACCTCTTCACTTGGCATTAGCTAGGGGTGCAAAGGCATCTGTTGGACTGCTTCTAGCTGCTGGGGCAGATTACAATTTGCAGGATGATGATGGTGACAATGCTTTCCATATAGCAGCAGAGACAGCCAAAATGATACGTGAAAATCTTGACTGGCTCATTGTTATGCTAAGGAATTCCGATGCTGATATTGAGGTCAGAAACCACAGTGGCAGGACACTACGTGACATCTTGGAGGCCCTTCCCCGAGAATGGATATCTGAAGATCTGATGGAGGCACTCATGAATAGAGGAGTTCATCTTTCTCCTACAATATTTGAAGTGGGAGACTGGGTGAAATTTAAAAGAACTGTCACAGCTCCTACCTATGGGTGGCAAGGTGCTAGACCAAAGAGTGTTGGATTTGTGCAAAGTATTCAAGATCGTGATAATCTCATTGTTTCATTTTGCTCTGGAGAAGTTCATGTTTTGGCAAATGAAGTTGTAAAACTCATTCCATTAGACCGAGGGCAACATGTACAGTTGAAAGAAGATGTGAAAGAGCCCAGGTTTGGTTGGCGTGGGCAGTCACGTGACAGCATTGGAACAGTGTTATGTGTTGATGATGATGGAATTCTCCGTGTTGGGTTCCCTGGAGCATCAAGGGGATGGAAAGCTGACCCTGCAGAGATGGAACGGGTTGAGGAATTCAAGGTTGGAGACTGGGTTCGGATTCGTCCTACTCTTACATCAGCTAAACATGGATTAGGATCCGTTACACCTGGAAGCATTGGCATTGTATATTGTATCAGACCAGACAGTAGTCTATTAATAGAACTCAGCTATCTTCCAAATCCATGGCATTGTGAACCAGAGGAGGTGGAGCATGTTGCTCCTTTTAGGATTGGTGATCGCGTCTGTGTGAAGCGTTCTGTTGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGGATAAGCGAGATTGAGAATGATGGTCTCCTAATAATTGAAATACCAAACCGACCCATACCATGGCAGGCTGATCCATCTGATATGGAGAAGGTGGAAGATTTCAAGGTTGGAGATTGGGTCAGAGTGAAAGCATCAGTTCCTGCTCCAAAGTATGGGTGGGAGGATATTAACAGGAACAGTATTGGGGTAATCCATAGCTTGGAGGAAGATGGTGATATGGGTGTTGCCTTTTGCTTCAGAAGCAAGCCTTTTTCTTGTTCAGTAACTGATGTGGAGAAAGTTCCTCCTTTTGAGGTGGGACAAGAAATTCACGTGATGCCATCTGTTTCTCAGCCACGACTTGGATGGTCAAATGAATCACCAGCTACTGTTGGGAAAATAGCAAGAATTGACATGGATGGTGCTCTTAATTTGAAAGTCACTGGTAGGCAAAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAACGACTTCCTGGATTTGAAGTTGGGGATTGGGTACGCTCTAAACCAAGCTTGGGGAATAGACCAAGTTATGACTGGAATACTGTTGGAAGGGAAAGTTTAGCTGTTGTGCATAGTGTACAGGATTCTGGATACTTGGAGTTGGCTTGTTGTTTCCGTAAAGGGAAGTGGATTGCTCATTACACAGATGTTGAAAAGGTTCCCATCTTCAAAATTGGGCAATATGTTAGATTTCGAAATGGTCTGGTTGAACCAAGGTGGGGTTGGAGAGGAGCTCAGCCTGAATCTCAGGGTGTTATAACCAGCATTCACGCTGATGGCGAAGTTAGGGTTGTTTTCTTTGGCTTGTCAGCATTATGGAGAGGAGATCCTTCAGATCTACAGATTGAACCAATGTTCGAAGTTGGAGAATGGGTGAGGTTGAAGGATAATGCAAATAGTTGGAAATCGATTGCACCGGGTAGTATTGGTGTTGTACAAGGAATAGGGTATGAAGAAGACGACTCAGACAGAAGCACTTATGTTGGCTTTTGTGGGGAGCAAGAAAAGTGGGTAGGACCAACCTCCCATCTCGAAAGAGTTGACAAACTCTTTGTTGGACAGAAAGTTAGAGTTAAGCAATGTATAAAGCAACCAAGATTTGGTTGGTCAGGGCACACCCATGCTAGTATTGGAACCATACAAGCAATCGATGCCGATGGAAAGCTCCGAATATACACTCCAGCCGGATCGAAGACATGGATGCTGGACCCATCAGAAGTGGAGGTGGTGGAAGAGAGGGAGCTTCGTATCGGAGACTGGGTAAAAGTTAAAGCGTCAGTTTCAACCCCAATCCACCAGTGGGGGGAGGTGAGTCACTCGAGCATTGGAGTGGTGCACCGGATGGAAGATGGAGATCTGTGGGTGGCATTCTGCTTTATGGAGAGACTCTGGCTTTGCAAGGCATGGGAAATGGAAAGGGTTAGACCATTCAAAGTGGGGGACAAGGTAAAAATTAGAGATGGACTCGTGGCACCGCGCTGGGGATGGGGAATGGAAACGCATGCAAGCAAGGGACAGGTGGTAGGAGTAGACGCAAACGGCAAACTGAGAATAAAGTTCCGGTGGAGGGAAGGTAGGCCTTGGATTGGGGACCCTGCTGATGTTGCCCTTGATGGAAACTAA 4686 0.4678 MKIPCCSVCQTRYNEEERVPLLLQCGHGFCKECLSRMFSSSPDATLTCPRCRHVSTVGNSVQALRKNYAVLALIHSAAAGAGGAAAGVEMWTAVIGGSGGRCRHQVAVKKVAVTEGMDLEWIQGNLENLRRASMWCRNVCTFHGAMKHEESLCLVMDRCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVVELHAAGVVCMNLKPSNLLLDSNGHAVVSDYGLATILKKPSCWKARPECDSSKIHSCMECIMLSPHYTAPEAWEPGKKSLNIFWDDAIGISPESDAWSFGCTLVEMCTGAIPWAGLSAEEIYRSVVKAKRLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFNAMLAIFLRHLQEIPRSPPASPDNDFVKRSVSNVTEPTPAPELDVPQEMPNPNHLHRFVSEGDATGVRDLLAKAASENGSDYISSLLESQNVDGQTALHLACRRGSAELVEAILEYKEANVDVLDKDGDPPLVFALAAGSPDCVRCLIKRNANVTSRLRDGLGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAVAKKYTDCAIVILENGGCRSMAIMNSKNLTPLHLCVATWNVAVVKRWVEVATSDEIAEAIDIPSPIGTALCMAAASKKDHESEGRELVRILLAAGADPSAQDSQNGRTALHTAAMTNDVDLVKVILAAGVDVNICNIHNSIPLHLALARGAKASVGLLLAAGADYNLQDDDGDNAFHIAAETAKMIRENLDWLIVMLRNSDADIEVRNHSGRTLRDILEALPREWISEDLMEALMNRGVHLSPTIFEVGDWVKFKRTVTAPTYGWQGARPKSVGFVQSIQDRDNLIVSFCSGEVHVLANEVVKLIPLDRGQHVQLKEDVKEPRFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVPAPKYGWEDINRNSIGVIHSLEEDGDMGVAFCFRSKPFSCSVTDVEKVPPFEVGQEIHVMPSVSQPRLGWSNESPATVGKIARIDMDGALNLKVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGNRPSYDWNTVGRESLAVVHSVQDSGYLELACCFRKGKWIAHYTDVEKVPIFKIGQYVRFRNGLVEPRWGWRGAQPESQGVITSIHADGEVRVVFFGLSALWRGDPSDLQIEPMFEVGEWVRLKDNANSWKSIAPGSIGVVQGIGYEEDDSDRSTYVGFCGEQEKWVGPTSHLERVDKLFVGQKVRVKQCIKQPRFGWSGHTHASIGTIQAIDADGKLRIYTPAGSKTWMLDPSEVEVVEERELRIGDWVKVKASVSTPIHQWGEVSHSSIGVVHRMEDGDLWVAFCFMERLWLCKAWEMERVRPFKVGDKVKIRDGLVAPRWGWGMETHASKGQVVGVDANGKLRIKFRWREGRPWIGDPADVALDGN 1561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03551 1561 CDD RING-HC_ScPSH1_like 5 52 - -
Aip10g03551 1561 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 2 77 - -
Aip10g03551 1561 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 82 1559 - -
Aip10g03551 1561 ProSiteProfiles Ankyrin repeat profile. 448 481 IPR002110 GO:0005515
Aip10g03551 1561 ProSiteProfiles Ankyrin repeat profile. 696 728 IPR002110 GO:0005515
Aip10g03551 1561 ProSiteProfiles Ankyrin repeat profile. 517 549 IPR002110 GO:0005515
Aip10g03551 1561 ProSiteProfiles Ankyrin repeat region circular profile. 663 692 - -
Aip10g03551 1561 Gene3D - 517 662 IPR036770 -
Aip10g03551 1561 Gene3D Transferase(Phosphotransferase) domain 1 92 383 - -
Aip10g03551 1561 Pfam Ankyrin repeats (many copies) 520 569 IPR002110 GO:0005515
Aip10g03551 1561 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 82 1559 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Aip10g03551 1561 SUPERFAMILY Protein kinase-like (PK-like) 104 400 IPR011009 -
Aip10g03551 1561 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 81 IPR013083 -
Aip10g03551 1561 Gene3D - 405 516 IPR036770 -
Aip10g03551 1561 ProSiteProfiles Ankyrin repeat profile. 482 514 IPR002110 GO:0005515
Aip10g03551 1561 SUPERFAMILY RING/U-box 5 58 - -
Aip10g03551 1561 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 2 77 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Aip10g03551 1561 SUPERFAMILY Ankyrin repeat 429 741 IPR036770 -
Aip10g03551 1561 Pfam Mind bomb SH3 repeat domain 1307 1428 IPR040847 -
Aip10g03551 1561 Pfam Mind bomb SH3 repeat domain 928 1048 IPR040847 -
Aip10g03551 1561 Pfam Mind bomb SH3 repeat domain 804 922 IPR040847 -
Aip10g03551 1561 Pfam Mind bomb SH3 repeat domain 1180 1301 IPR040847 -
Aip10g03551 1561 Pfam Mind bomb SH3 repeat domain 1437 1556 IPR040847 -
Aip10g03551 1561 Pfam Mind bomb SH3 repeat domain 1054 1172 IPR040847 -
Aip10g03551 1561 ProSiteProfiles Ankyrin repeat region circular profile. 696 728 - -
Aip10g03551 1561 Pfam Ankyrin repeats (3 copies) 642 727 IPR002110 GO:0005515
Aip10g03551 1561 Pfam Ankyrin repeats (3 copies) 427 511 IPR002110 GO:0005515
Aip10g03551 1561 Pfam RING-type zinc-finger 6 49 IPR027370 -
Aip10g03551 1561 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Aip10g03551 1561 ProSiteProfiles Protein kinase domain profile. 71 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03551 1561 Pfam Protein kinase domain 103 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03551 1561 Gene3D - 663 796 IPR036770 -
Aip10g03551 1561 SMART ring_2 6 51 IPR001841 -
Aip10g03551 1561 PRINTS Ankyrin repeat signature 645 659 IPR002110 GO:0005515
Aip10g03551 1561 PRINTS Ankyrin repeat signature 449 464 IPR002110 GO:0005515
Aip10g03551 1561 ProSiteProfiles Ankyrin repeat region circular profile. 448 470 - -
Aip10g03551 1561 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Aip10g03551 1561 ProSiteProfiles Ankyrin repeat profile. 663 695 IPR002110 GO:0005515
Aip10g03551 1561 SMART ANK_2a 696 725 IPR002110 GO:0005515
Aip10g03551 1561 SMART ANK_2a 663 692 IPR002110 GO:0005515
Aip10g03551 1561 SMART ANK_2a 585 616 IPR002110 GO:0005515
Aip10g03551 1561 SMART ANK_2a 623 658 IPR002110 GO:0005515
Aip10g03551 1561 SMART ANK_2a 448 478 IPR002110 GO:0005515
Aip10g03551 1561 SMART ANK_2a 482 511 IPR002110 GO:0005515
Aip10g03551 1561 SMART ANK_2a 729 764 IPR002110 GO:0005515
Aip10g03551 1561 SMART ANK_2a 550 581 IPR002110 GO:0005515
Aip10g03551 1561 SMART ANK_2a 517 546 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03551 Aip-Chr10 133898166 133909847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03551 326 514 MAP Kinase Kinase Kinase AT2G31800 29.146 4.62e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Aip10g03551 Pkinase 3.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03551 K16279 - gmx:100777576 2787.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03551 10 133898166 133909847 Aip10g03551 10 133898166 133909847 ECH