Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03546 ATGGCTTCCAACGGTAAGCATCACGAACAAGAAGAAGAGCTTTTCAAACGAATCGAAGACGAAGAAGAAGAAGAAGATTATGAAGAAGAAGAAGACGGCGAAGAAGGATGGGACGACTGGGAAGGAGACGACGGTGATCCACAATCGGAATTGCTCTGCCTCTTCTGTGATTCTCGCTACGCTTCTTGCGATTCCCTTTTTGCACATTGCGCTTCCATTCACCACTTCGATTTCCATGCCACTCGAAAAGCTCTTACCTTGGATTTCTATTCCTCCTTCAAGCTTATTAACTATATCCGCTCTCAGGTTACTTTCCTTTTTCTCTTTTTAGATGTTAATCTAAGGTTCTATAACAAATGTTGGAGCTGTGGATCGACATGTCAGTCCAACCAAGACTTGCTGAATCATCTGCATGATGCAATTGACTTAAGTGATATAAAGATTAAGTGGGATGACGATAGATATTTAAAACCTTTTATGCAAGATGATTCACTGTTGTACAGTTTTGTTGATTATGAAGATGGGGAAGATGAGCAAATTCCACCAATGGATGAAGATCTTATGATGGATTTGAAGAACTCTATAGACTCTCTTGATTTGAAAAATGTGGTAGTTACTGATGGTGTACATGATACGAGTAGCAGCCAGAAGGTTGCTTCTGTTCCTAATGATCATTTGAACCAGGCTAGTTCTTCAGACAAGGAACTTGTTAATGGCAAGAACTCTAGAGCATATGTGCCTTCAATTGATGAGGCTAGAGAAGAAGGGCTCTTGTTGGCCAAATCTCAAAATCACTTTGAAAAGCAGATTAAGATGGTTAATGAAAGTTATTTTGGGTCTTATAGCTCATACGGCATCCACCGTGAGATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGCCAAGCAATTTTGAAAAATCCCTCTCTCCTAAATGGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGCATCCTGAGCCTATTTGCAGCTCAAGCAGGGGCATCACGGGTCATAGCAGTTGAGGCTAGTACCAAGATGGCAGCAGTAGCATCTCAGGTTGCAAAAGACAACGGTCTCTTGCTGGATAAAAGCCAGTGTGGTGTGAATGGCCATCAAAAGGGAGTGGTAGAAGTGATTCATGGTATGGTTGAAGAAATTGACAAAAATGTTGGAATTAAACCTCACAGTGTTGATATATTGTTAAGTGAATGGATGGGATATTGCCTGCTATACGAATCCATGCTTGATTCTGTGCTCTATGCACGCGACCGGTGGTTGAAGACTGGAGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTCGCAGGATTCGGAAAAGGTGGCACAAGTCTTCCATTTTGGGAAAACGTGTGTGAATTTGACATGTCTTTCATTGGGAAGGAACTTGTCAAAGATGCTGCCCAAATTCCTATAGTCGATGTTGTGGACTCTCAAGATTTAGTTACCACTTCTGCGGTTCTTCAGACCTTTGATTTGGCAACCATGAAGCCTAATGATGTTAATTTCACTGCAACTGCTACTTTGGAACCAAAATCAAGAGTTTTGGAATATGGAGAAATGCGTGTAGATTCTGAAACATGCTGCCGGTGTTATGGAGTTGTATTGTGGTTTGAAACCAGATTTACAAGCAGATTCTGCCGTGAAGCGCCAACTGTGTTATCAACATCTCCTTACACACCAAAAACACATTGGTCACAAACAATCTTAACCTTTAAGGAACCCATTGAGATTGGATTTCAGAAAGGAAACAATGGTGATCTGGCAGCAATCGGCACTGAGGACTTTCCTGCTGCAAAGGTTGATGTGCGTGTCAGCATTGTACGTTCCACAGAGCATCGCAGTATTGATATTTCATTAGAAGTTGTCGGTGTTAGTCCTGATGGCCGGAGACGCAGTTGGCCGGCTCAATTTTTTTCTTTGCAGTAG 1950 0.4205 MASNGKHHEQEEELFKRIEDEEEEEDYEEEEDGEEGWDDWEGDDGDPQSELLCLFCDSRYASCDSLFAHCASIHHFDFHATRKALTLDFYSSFKLINYIRSQVTFLFLFLDVNLRFYNKCWSCGSTCQSNQDLLNHLHDAIDLSDIKIKWDDDRYLKPFMQDDSLLYSFVDYEDGEDEQIPPMDEDLMMDLKNSIDSLDLKNVVVTDGVHDTSSSQKVASVPNDHLNQASSSDKELVNGKNSRAYVPSIDEAREEGLLLAKSQNHFEKQIKMVNESYFGSYSSYGIHREMLSDKVRMDAYGQAILKNPSLLNGAVVMDVGCGTGILSLFAAQAGASRVIAVEASTKMAAVASQVAKDNGLLLDKSQCGVNGHQKGVVEVIHGMVEEIDKNVGIKPHSVDILLSEWMGYCLLYESMLDSVLYARDRWLKTGGAILPDTATIFVAGFGKGGTSLPFWENVCEFDMSFIGKELVKDAAQIPIVDVVDSQDLVTTSAVLQTFDLATMKPNDVNFTATATLEPKSRVLEYGEMRVDSETCCRCYGVVLWFETRFTSRFCREAPTVLSTSPYTPKTHWSQTILTFKEPIEIGFQKGNNGDLAAIGTEDFPAAKVDVRVSIVRSTEHRSIDISLEVVGVSPDGRRRSWPAQFFSLQ 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03546 649 CDD AdoMet_MTases 316 434 - -
Aip10g03546 649 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 25 647 IPR025799 GO:0016274|GO:0018216
Aip10g03546 649 MobiDBLite consensus disorder prediction 1 15 - -
Aip10g03546 649 Gene3D - 437 640 - -
Aip10g03546 649 SUPERFAMILY beta-beta-alpha zinc fingers 32 178 IPR036236 -
Aip10g03546 649 Pfam C2H2 type zinc-finger (2 copies) 53 139 IPR041661 -
Aip10g03546 649 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 280 585 IPR029063 -
Aip10g03546 649 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 274 606 IPR025799 GO:0016274|GO:0018216
Aip10g03546 649 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 25 647 - -
Aip10g03546 649 Coils Coil 11 31 - -
Aip10g03546 649 MobiDBLite consensus disorder prediction 1 41 - -
Aip10g03546 649 Gene3D Vaccinia Virus protein VP39 266 435 IPR029063 -
Aip10g03546 649 Pfam Methyltransferase domain 316 431 IPR041698 -
Aip10g03546 649 MobiDBLite consensus disorder prediction 16 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03546 Aip-Chr10 133859913 133863803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03546 21 648 C2H2 Transcription Factor Family AT3G12270 54.462 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03546 K11436 - gmx:100778113 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03546 10 133859913 133863803 Aip10g03546 10 133859913 133863803 ECH