Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03526 ATGGCAGAAACTGCAGTATTGTTTGTTCTGAATCAAGTTCACCAGCTCCTACAAGAAGAAAGAAATTTTCTGGCAAGTGGCCGTCAGGCATTCGCAGAGATTAAGGATGAATTGGATAGCATTCACGCCTTCCTCAGGGATGCAGATTTAAGGGCTGCAAATGGTGAAGCTAATGAAGGACTAAAGATTTGGGTGGCGCAGCTGCAAGAAGCATCGGTTCGCATAGAAGATGTCATTGATGAATACATTCATGTGGCACAAAAGGTGTATCATCCTGGAGTTATGGCTTCAATCCAGAAGATTGTTCACTTCCTTGTGACTCTGAAGTCTCATTATCGGATATTATCTGAGATAGAAGACATTAAGTTAACAATTCGAGGAATCAAAGAAAGAAGTGAAAGGTATAACTTTCGGTCACCATTTGAACAACTAGGTTCAAGCAGTTCTAGAAGGATTGAAGCTGTCAAATGGTATGATCCTCGATTAGCTTCCCATTTCATTGAAGAAGCAGAAGTTGTGGGATTCGAATCTCCAAGAAACGAATTGGTTGATTGGTTAGTTGATGGACCAGTAGAGTGCTCTGTGATTTCAGTGGTAGGAATGGGAGGAATAGGAAAAACCACTCTTGGCAAGCTTGTTTTTGATAGCCAAGTGGTCAAAGTTCACTTTGATTGTCACGCCTTCGTGACAGTTTCTCAATCATACACGATAAGGGGTTTATTGATTGACCTGATAGAGCAGTTTTTCAAAGACACGCCTCTTCCTCAGAATATACAGAACATGGAGGAGAAGTCACTAATTACAAAAGTGAGGCAGTACCTTCAGCAAAAGAGGTATTTGGTTTTCTTTGATGATGTATGGAAACAAAGTTTTTCTGATGAGATTGAACTTGCCATGCCTAATAACAACAAAGGGAGTAGGATCATAATCACAACTAGAATGATGCATGCTGCTGAGTTCTTTAAGAAGGCTTTTCCTGTTCATGTGCACAATCTACAACTTTTGCCTCCTAATAAAACTTGGGAACTCTTCTGCAAGAAGGCATTTAGATACGAGCTCGGCCATAATTGTCCATCTGAGCTCATGGATGTGTCTCATGAAATCATTAAAAAATGCAACGGACTACCACTGGCAATTGTGGCCATCGGTGGTCTATTGTCGACGAAACCTAAAACTGTGTTCGAATGGAAAAAGACTACTTCATTGGTCCTATGA 1215 0.4074 MAETAVLFVLNQVHQLLQEERNFLASGRQAFAEIKDELDSIHAFLRDADLRAANGEANEGLKIWVAQLQEASVRIEDVIDEYIHVAQKVYHPGVMASIQKIVHFLVTLKSHYRILSEIEDIKLTIRGIKERSERYNFRSPFEQLGSSSSRRIEAVKWYDPRLASHFIEEAEVVGFESPRNELVDWLVDGPVECSVISVVGMGGIGKTTLGKLVFDSQVVKVHFDCHAFVTVSQSYTIRGLLIDLIEQFFKDTPLPQNIQNMEEKSLITKVRQYLQQKRYLVFFDDVWKQSFSDEIELAMPNNNKGSRIIITTRMMHAAEFFKKAFPVHVHNLQLLPPNKTWELFCKKAFRYELGHNCPSELMDVSHEIIKKCNGLPLAIVAIGGLLSTKPKTVFEWKKTTSLVL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03526 404 CDD RX-CC_like 2 130 IPR038005 -
Aip10g03526 404 PRINTS Disease resistance protein signature 273 287 - -
Aip10g03526 404 PRINTS Disease resistance protein signature 372 386 - -
Aip10g03526 404 PRINTS Disease resistance protein signature 195 210 - -
Aip10g03526 404 PANTHER DISEASE RESISTANCE PROTEIN RP 30 400 IPR044974 GO:0006952
Aip10g03526 404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 399 IPR027417 -
Aip10g03526 404 Gene3D - 4 114 - -
Aip10g03526 404 PANTHER - 30 400 - -
Aip10g03526 404 Pfam NB-ARC domain 179 400 IPR002182 GO:0043531
Aip10g03526 404 Pfam Rx N-terminal domain 5 88 IPR041118 -
Aip10g03526 404 Gene3D - 159 325 IPR027417 -
Aip10g03526 404 Gene3D - 335 402 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03526 Aip-Chr10 133698586 133699936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03526 171 391 WRKY Transcription Factor Family AT5G45050 29.258 3.13e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03526 K13457 - gmx:100801561 507.679