Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03516 ATGGAACCATTCGTTTGGTACTGCAAGCCTGAATCAAACAGTGTTTGGGCCAAAGCAGTTGATAGCGCCTTTGGTTCCTATACGCCATGTGCAATCAATACTCTTGTAATTTCAACCTCCAATTTCGTTCTTATGGGACTTTGCTTCTATAGAATTTGGCTTATTGCTACAAACACAAAGGCTCAGAGGTTTTCCTTGCGTTCTAATTGGTATAATTATGTTCTCGCATTGTTGGCTTCTTATTGTGCTATTCAGCCTCTGTTGAGATTGTTGACTGGAATTTCAGCATTTAACTTGAATGGTGAAACTGGATTTGCTCCTTTTGAGGCAATGGCCTTGATAGTTGAAGCGCTTACATGGTGTTCGATGATAGTTCTCATTCTATTGGAAACCAAGGTTTATATCCGACAATTTAGATGGGTGGTGCGGTTTGGAGTTATCTATGTTTTGGTTGGAGATGTTGTATTGCTTAACCTTCTTCTGTCAGTGAAAGATTACTGCATAAGACACAACAATGGACTAATTATGGATGCTTTTCTGATGCAGGTCTTGTTTGGTACATTGCTTTTTGTTTACGTACCTAACTTGGTTCCTTATGATGGCCATATAACAATGCAAGACGAGCTTCCTGACAATGCTGAGTATGAACTACTTTGTGGAGAGGAACAAGTTTTCCCTGAGATGCATGCTAATATATTCTCTAGATTATGTTTTGGATGGGTAACTCCACTCATGCGGCAAGGTTACAGAAAACCCATCAGAGAAAAGGATGTTTGGAAGCTAGACAAGTGTGATCAGACAGAGACATTAACAGAAAAGTTTCAAAAGTGTTGGATGTTAGAATTTCAAAGCTCTAACCCATGGCTTTTAAGATCTTTGAACAACAGCTTAGGGAAGAGGTACTATTTATTACTAAAATACCAACTTTCAAAACGATTAAGCAATAAACTTATATGTGAAGGCCTCAATGTGGTATTATATTCAATGCAAAATCAAGATCCATCTTGGGTTGGTTACATCTATGCTTTCTCCATATTTGTTGGAGTGTCACTTGGTGTTCTATGTGAAGCTCAATATTTCCAGAATGTGATGCGTGTTGGTTTTCAGCTTAGATCAACTTTGGTGGCTGCTATATTTAGAAAATCTTTGAGGCTAACTAATGAAGGTCGAAAGAAGTTCTCATCTGGGAAACTTATGAATATGATAACTACAGACGCCAATGCACTACAGCAAATATGTCAACAACTTCATGGACTTTGGTCAGCACCATTCCGTATCATCATAGCGATGGTTCTCCTATACCAGCAACTAGGCGTTGCTTCACTCATTGGATCGCTAATGCTAGTTCTCATTGTCCCACTACAGGCAAGTTTATATATGATTTCTTTCACACGTACATACGTGATTGCCAAAATGAGAAAACTGACAAAGGAAGGACTGCAGCAAACAGACAAGAGGGTTGGTATCATGCATGAAATTCTGGCTGCCATGGATACTGTAAAATGTTATGCATGGGAAACAAGCTTTCAATGTAGAGTACAAAGCATACGGGATTATGAGCTATCTTGGTTTCGCAAAGCACATCTGTTAAATGCTCTCAATACCTTTATTCTAAATAGCATCCCAGTTCTTGTGACTGTAACTTCATTTGGAATGTTTACTTTACTTGGTGGAGAATTGACTCCTGCAAGGGCATTTACCTCACTATCTCTATTCACAGTTTTGCGCTTTCCATTAAACATGCTACCAAATTTACTAAGTCAGGTTGTAGCAAATGCAAATGTATCGTTGCAAAGGCTGGAAGAATTATTCTTGGCTGAGGAGCGAAATCTAAAACAAAATCCACCTCTTGTACCAGGACTTCCAGCCATCTCAATAAAAAATGGGAACTTTTCATGGGATGCAAAGGCAGAGAAGTCCACACTATCAAATATCAATGTGGAAATACCAATTGGAAGCTTAGTTGCAATAGTTGGTGGTACTGGAGAAGGAAAAACATCACTTATTTCAGCAATGATTGGAGAGCTACCTCTTTTAAAAGATGGAAATGCTATAATTAGAGGCACTGTTGCTTATGTTCCTCAGATTTCATGGATTTACAATGCTACAGTACGCGAAAACATATTGTTTGGGTCAGAATTCGAATATGAACGATATTGGAAGGCCATTGATGTCACTGCTTTACAGCATGATCTCAACTTATTACCAGCACGTGATTTTACAGAGATTGGAGAAAGAGGAGTCAATATTAGTGGTGGACAAAAGCAAAGAGTTTCCTTAGCTAGGGCAGTCTATTCAGATTCAGATGTATATATATTCGATGATCCTTTAAGTGCTCTCGATGCTCATGTTGCTCATGAGGTTTTCAAAAACTGTATAAAGGAAGCACTGGGAGGAAAAACAAGGGTTCTTGTCACCAACCAGCTACATCTTCTCCCTCAAGTGGATAAAATTATTCTCCTTAGTGACGGCATGATTAAAGAGCAGGGAACTTTTGAGGAGTTATCAAAGTGTGGGTATCTATTTCAGAGACTAATGGAAAATGCTGGGAAAATGGAACAACAATCAGAGAGTAATGAAGGTAGAGAGGACCATGTCGAGGTTAATGTTTCAACCTCGAGCAATGAGGCACTTGTTCAGATTCCAAACGACACAAGCTATGAGAAGAAGGGAAAATTACGCAAATCAGTGCTTGTTAAGCAAGAAGAGCGGGAGACTGGTGTGGTTAGCTTGAAAGTTTTGGCGAGGTATAAAGCTGCATTAGGAGGCCTATGGGTAGTTTTCATACTCTTTGCCTGCTACACATTAACAGAAGTTCTTCGAATTTCAAGTAGCACATGGTTAAGTGTGTGGACAGATCAAGATTCCACTTCAGATTATAATCCAGTATATTTTCTTGTCGTCTATGCACTTTTCTCCTTTGGACAGGTAGCTGTAACACTTGCAAACTCTTATTGGTTGATCATTTCTAACCTCCGTGCTGCAAAAAGATTGCATGATGCAATGCTAGATAAAATACTTCGGGCCCCAATGGTATTCTTCCAAACTAATCCTGTTGGCCGCATAATTAATAGGTTTGCAAAAGACATGGGAGACATAGACACCATGGTTTCTACTTTGGTGAATCAGTTTATGGGGCAACTCTGGCAGCTACTTTCTACCTTTGTTCTTATTGGCACTGTGAGCACAATATCTCTGTGGGCTATAATGCCATTGCTGATCTTCTTTTATGGAGCTTATATATATTACCAGAGCACAGCTCGAGAAGTGAAGCGTTTGGATTCAATTACAAGATCTCCTGTTTATGCACACTTTGGAGAAGCGTTGAATGGTTTGGCAAGCATACGCGCTTACAAAGCATATGATAGAATGGCTCACATTAATGGAAAATTCATGGATAAAAATATCAGATTTACCCTTGTGAATATTAGTTCAAACCGTTGGCTCACCATAAGGTTAGAATCATTAGGAGGGCTCATGATTTGGTTCATAGCTACATTTGCTGTATTGCAAAATGGAAGATCTGAAAACCAGGCAGCATTTGCATCTACAATGGGCCTTCTTCTCAGTTATACTTTAAACATAACAAGTCTCTTGAGTGGTGTCCTGAGACAAGCAAGTAGAGCTGAAAATAGTTTAAATGCTGTTGAGCGTGTTGGCACATACATTGATTTGGAAACTGAGGCTCCAAGAATAATTGAGACAAACCGTCCACCACCAGGATGGCCAACATCTGGATTAGTTGAGTTTGAGAATGTTGTCCTGAGTTACAGGCCTGAACTTCCTCCAGTCTTGCATGGACTGTCCTTTACGGTATTGCCAACCGAGAAGGTTGGGGTAGTTGGAAGAACTGGTGCAGGAAAATCTAGCATGCTTAATGCTTTATTCCGTATCGTTGAGCTACAAAGTGGAAGAATCATTATTGATGGTTTTGACATTTCTATGTTTGGACTAGCAGATTTGCGAAGAGTTCTAACTATCATACCTCAATCACCAGTTCTTTTCTCTGGAACTGTTCGCTTCAATCTTGATCCATTTACTGAACACAATGATGCCGACATGTGGCAAGCTTTAGAAAGGGCACATTTGAAGGATGTAATAAGAAGAAATCCACTTGGTCTAGATGCACAGGTCTTGGAGGGTGGAGATAATTTTAGTGTTGGACAGAGGCAACTATTAAGTCTAGCCAGAGCATTGCTTCGAAGATCAAAGGTTCTTGTCCTGGACGAAGCGACTGCTGCTGTTGATGTTAGAACAGATGCTCTTATACAGAAAACCATCCGACAAGAGTTTCAGTCCTGCACAATGCTCATCATTGCACACAGACTAAATACAGTTATTGACTGCAATCGGATTCTATTGCTCGATTCTGGACGGGTAGTCCTTGAGTATGACTCGCCGGACAAACTCTTATCGAATGAAGCAAGTGCATTCTACAAGATGGTTCAAAGTACAGGAGCTGCAAATGCTGAGTATTTATGTAGTTTGGTTTTTGGAAGGATTGTGAACAATTCTAATGAAGAAAACAAGGGACTTGAAAATCAAATGAGACAGTTAGCTTCTTCCAACTGGGCTGCTGCTACACAATGTGCTATAGCTGCAACCCTTTCTTCATTGCATCTTAACCTTCAAAGCCCAAATGAAACTAAAGATAACAAAGATTTCCTCGAAAAAACGAAGGACGCGTTGACAACACTTCAGGAAGTTCTGGAAGGGAAGCATGATGATGTTATACAACAGACACTTGTTAAATACAATGTTCCTACAGAAAGATGGTGGTCTACTCTTTATCAATTAGTTGAAGGTTTGTCTGTCTTGATCAAGTTACCTCCGAAAAACATTCAACAATTGGAACTTGATTTTGAAAGAAGACCCGGATCCGATACTAACTTCAATAAGCCCATAGCCCATTCCGCCTTTCTGCGCCATTTTGTCCCTAATCTGAATCTCCATTTGCTTTCTTTCTTCTCGGGAACGCCGCTGCTGATTCCTTCGAGTGAGATTGTTAGCGAAGATTGTAAAATTTATGGCATTCCCTTGAAGAATCACCTGGTTTTCATGTTGTCATCCTTTAAAGCCATTATATTGCCACAACCGCAAGTATAA 5106 0.3978 MEPFVWYCKPESNSVWAKAVDSAFGSYTPCAINTLVISTSNFVLMGLCFYRIWLIATNTKAQRFSLRSNWYNYVLALLASYCAIQPLLRLLTGISAFNLNGETGFAPFEAMALIVEALTWCSMIVLILLETKVYIRQFRWVVRFGVIYVLVGDVVLLNLLLSVKDYCIRHNNGLIMDAFLMQVLFGTLLFVYVPNLVPYDGHITMQDELPDNAEYELLCGEEQVFPEMHANIFSRLCFGWVTPLMRQGYRKPIREKDVWKLDKCDQTETLTEKFQKCWMLEFQSSNPWLLRSLNNSLGKRYYLLLKYQLSKRLSNKLICEGLNVVLYSMQNQDPSWVGYIYAFSIFVGVSLGVLCEAQYFQNVMRVGFQLRSTLVAAIFRKSLRLTNEGRKKFSSGKLMNMITTDANALQQICQQLHGLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLIVPLQASLYMISFTRTYVIAKMRKLTKEGLQQTDKRVGIMHEILAAMDTVKCYAWETSFQCRVQSIRDYELSWFRKAHLLNALNTFILNSIPVLVTVTSFGMFTLLGGELTPARAFTSLSLFTVLRFPLNMLPNLLSQVVANANVSLQRLEELFLAEERNLKQNPPLVPGLPAISIKNGNFSWDAKAEKSTLSNINVEIPIGSLVAIVGGTGEGKTSLISAMIGELPLLKDGNAIIRGTVAYVPQISWIYNATVRENILFGSEFEYERYWKAIDVTALQHDLNLLPARDFTEIGERGVNISGGQKQRVSLARAVYSDSDVYIFDDPLSALDAHVAHEVFKNCIKEALGGKTRVLVTNQLHLLPQVDKIILLSDGMIKEQGTFEELSKCGYLFQRLMENAGKMEQQSESNEGREDHVEVNVSTSSNEALVQIPNDTSYEKKGKLRKSVLVKQEERETGVVSLKVLARYKAALGGLWVVFILFACYTLTEVLRISSSTWLSVWTDQDSTSDYNPVYFLVVYALFSFGQVAVTLANSYWLIISNLRAAKRLHDAMLDKILRAPMVFFQTNPVGRIINRFAKDMGDIDTMVSTLVNQFMGQLWQLLSTFVLIGTVSTISLWAIMPLLIFFYGAYIYYQSTAREVKRLDSITRSPVYAHFGEALNGLASIRAYKAYDRMAHINGKFMDKNIRFTLVNISSNRWLTIRLESLGGLMIWFIATFAVLQNGRSENQAAFASTMGLLLSYTLNITSLLSGVLRQASRAENSLNAVERVGTYIDLETEAPRIIETNRPPPGWPTSGLVEFENVVLSYRPELPPVLHGLSFTVLPTEKVGVVGRTGAGKSSMLNALFRIVELQSGRIIIDGFDISMFGLADLRRVLTIIPQSPVLFSGTVRFNLDPFTEHNDADMWQALERAHLKDVIRRNPLGLDAQVLEGGDNFSVGQRQLLSLARALLRRSKVLVLDEATAAVDVRTDALIQKTIRQEFQSCTMLIIAHRLNTVIDCNRILLLDSGRVVLEYDSPDKLLSNEASAFYKMVQSTGAANAEYLCSLVFGRIVNNSNEENKGLENQMRQLASSNWAAATQCAIAATLSSLHLNLQSPNETKDNKDFLEKTKDALTTLQEVLEGKHDDVIQQTLVKYNVPTERWWSTLYQLVEGLSVLIKLPPKNIQQLELDFERRPGSDTNFNKPIAHSAFLRHFVPNLNLHLLSFFSGTPLLIPSSEIVSEDCKIYGIPLKNHLVFMLSSFKAIILPQPQV 1701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03516 1701 ProSitePatterns ABC transporters family signature. 1385 1399 IPR017871 GO:0005524
Aip10g03516 1701 Pfam ABC transporter 642 777 IPR003439 GO:0005524
Aip10g03516 1701 ProSitePatterns ABC transporters family signature. 750 764 IPR017871 GO:0005524
Aip10g03516 1701 Gene3D - 1232 1485 IPR027417 -
Aip10g03516 1701 CDD ABC_6TM_ABCC_D1 331 600 IPR044746 GO:0140359
Aip10g03516 1701 SUPERFAMILY ABC transporter transmembrane region 924 1228 IPR036640 GO:0005524|GO:0016021
Aip10g03516 1701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 848 IPR003439 GO:0005524
Aip10g03516 1701 Coils Coil 1502 1522 - -
Aip10g03516 1701 Gene3D - 608 873 IPR027417 -
Aip10g03516 1701 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 35 1504 - -
Aip10g03516 1701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 847 IPR027417 -
Aip10g03516 1701 Pfam ABC transporter 1265 1413 IPR003439 GO:0005524
Aip10g03516 1701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1248 1483 IPR003439 GO:0005524
Aip10g03516 1701 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 928 1211 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip10g03516 1701 CDD ABCC_MRP_domain1 624 824 - -
Aip10g03516 1701 PANTHER ABC TRANSPORTER C FAMILY MEMBER 11-RELATED 35 1504 - -
Aip10g03516 1701 SUPERFAMILY ABC transporter transmembrane region 328 763 IPR036640 GO:0005524|GO:0016021
Aip10g03516 1701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1239 1482 IPR027417 -
Aip10g03516 1701 CDD ABC_6TM_ABCC_D2 927 1223 IPR044726 GO:0140359
Aip10g03516 1701 SMART AAA_5 651 831 IPR003593 -
Aip10g03516 1701 SMART AAA_5 1274 1468 IPR003593 -
Aip10g03516 1701 CDD ABCC_MRP_domain2 1246 1467 - -
Aip10g03516 1701 Pfam ABC transporter transmembrane region 927 1179 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip10g03516 1701 Pfam ABC transporter transmembrane region 330 579 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip10g03516 1701 Gene3D ABC transporter type 1, transmembrane domain 890 1229 IPR036640 GO:0005524|GO:0016021
Aip10g03516 1701 Gene3D ABC transporter type 1, transmembrane domain 282 607 IPR036640 GO:0005524|GO:0016021
Aip10g03516 1701 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 322 591 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03516 Aip-Chr10 133598162 133617258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03516 624 837 Calmodulin-binding Proteins AT2G36910 29.956 2.01e-24 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03516 - K05665 gmx:100811691 2584.29