Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03514 ATGGTTGAGGGTTTAGGGTTTAGGGTTCAGGATTTTATGGGGTTTAGGATTTACGAAATAACGCTTGCGGAATTTTCTTATTCCATAACTAGCCTTCCACAAAATTTAATTAACCTGAAATATTCTCCGACTGTACCATCTATTCTGTCTGTTGTTCGTGCCACTCCTTCGCGTCTCCGATCACCGCGGTGGTGCAGCTTCGCAATCACAGCCAATCGGCGTTTCCATCATCACACTTCACACTTCACAGTTCAAAGTGCAGACGAGATGGCTGGAGGTGTTATTCAGCAGTTATTGAGGAGGAAACTCCAATCTCATTCTCCTAATGCTTTATCTATGTCTTCCATTCTCACAAAGAAAGATGGGGATGGTTCGACTGGCAGCAGCTCGTTAAGAGCACTTGCGTTAATTGGGGCTAGTGTCACTGGGTTTTTGGGTTTTGCGACAACAGCATCAGCTGATGAAGCTGAGCATGGCCTCGCATGCCCAAGCTATCCATGGCCTCACCAGGGCATCCTCAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTCTATACACAAGTCTGTGCGTCCTGCCATTCTATGTCTTTGATATCATACCGCGATTTGGTTGGCGTTGCTTATACAGAAGAAGAAGTAAAGGCTATGGCAGCTGAGATTGAAGTGGTTGACGGCCCTAATGATGAGGGCGAGATGTTCACACGCCCTGGTAAACTCAGTGATCGCTTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCTGATCTAAGTCTTATTACCAAAGCTCGTCACAATGGCCAGAATTATGTGTTTGCCCTTCTAACTGGTTATCACGATCCCCCTGCTGGTGTTTCGATTAGAGAGGGTCTCCACTATAATCCTTATTTCCCCGGCGGAGCCATTGCCATGCCTAAAATGCTTAATGATGGTGCTGTTGAATATGAAGATGGAACTCCCGCCACCGAATCTCAGGTACTTATGTTTATGGGATTCAAATGGATCTTTGTTCTAACATTGGCATTGCTTCAAGCTGGGTACTATCGTCGCCTTAGGTGGTCTGTTCTAAAATCTCGGAAGCTGTGCTTCTCCGCAGCACAACACAACACTCCTTCGCAAGCGGCGCCATCATCTCACGTTCTTCCTTTCCCTTTTCGGAAGGAGCAAACGCAATTTGTGGTCCACTACAAGTCTACAACTATGAAAACTTCATCTTCTCTTCATCCACACCACCATTTTCCTTCCACTAAATTTTACACTTCCATCACCACAAGAGTTTACATCAGGACTCAACTCTCTTTTCCTGCAAAGGTGTTCTTGTGCCAGGCAAAATCTGGCACAAATGGGTCGTTAAACGTGCGAGTGATGCCTCCCACTCTGTTAGCAGCAGAAAAGGAAGAAGCCAAGGCTGTATTGATGCTGTTTTTGAAAAAAGAAGGCTTGAGCAATGCCATTGCAGCGAGAACTGTCAACAAATCAGATCCTTTTATTGATCACCTTGTCTCGGTGCTTCACTCTAAACACAAATCTCGGTACCTCGTAGGGAGAGAACTTACAACACTTGAAATCAGGGATGCTCTTGTCCCATACCTTGAATCTCTTCTCGAAGAGCACGGTGATAGTCTAGTCGATGTAGTCGAAAACTATCCAAATCCCCCGGTTAAGGAAAAACCAGCTGTGCAGGTTCCTCCTCCTACTCCAATAATAGACTCTAAGAAGCTTAGAACCGTGTCTCGAGTGAATGCAATAGACACGACTGCTGGCAATCTTCGCCCTCATATTGTCTATCTCATAGAGTTCGGTATGAGTATTGAGCAAATCAATGGTATTATTCGGCGATTCCCGTCTTTTGCCTACTACAGCTTGGAGGGTAAAATTAAGCCTGTAGTTGAGTTTTTTCTTGAACTTGGAGTTCCGAAAGAGGACATCCCCACCATCCTCACTAAAAGGCCTCAATTATGTGGAATCAGCCTGTCGGAAAATCTTAAACCCACCATGAAGTTCTTAGAATCCTTAGGCGTTGACAAGAAACAATGGGCGAAGGTGATATACCGCTTCCCGGCTCTTCTAACTTATAGTAGGGAGAAGGTGGAGGAGAGCATAGATTTTCTCCGAGAATCAGGCCTGTCAGACGATAACATAGGTAAGATCTTAACTCGCTGCCCCAATATTGTAAGTTATAGTGTAGAGGACAACCTACGACCCACGGCTAATTACTTCCGATCCTTGGGAGTGGATGTTGGTGTTCTTCTGTTCCGTTGTCCACAGAATTTCGGTCTTAGCATTGAGGCCAATCTGAAGCCTGTAACACAGTTTTTCTTGGAAAAGGGATACACTTTGGATGAAATTGGGACTATGATTTCAAGATTTGGTGCCTTGTACACCTTTAGCTTGTCAGACAATTTGATTCCGAAATGGGATTTCTTCATCACTATGGGTTACCCAAATTCTGAGCTTGTTAAATTCCCTCAGTTTTTTGGATACAGTTTGGAAGAAAGGATTAAACCAAGATATGCACGGATGAAGAGAGCTGGGGTCAGGTTATTGCTCAACCAGGTTCTGTCACTGTCTAGCCGGAACTTCGAAGAGGCCTTAGAAAAGAAACTGAAAAAGAATTCGAGTTGA 2658 0.4477 MVEGLGFRVQDFMGFRIYEITLAEFSYSITSLPQNLINLKYSPTVPSILSVVRATPSRLRSPRWCSFAITANRRFHHHTSHFTVQSADEMAGGVIQQLLRRKLQSHSPNALSMSSILTKKDGDGSTGSSSLRALALIGASVTGFLGFATTASADEAEHGLACPSYPWPHQGILSSYDHASIRRGHQVYTQVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYHDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQVLMFMGFKWIFVLTLALLQAGYYRRLRWSVLKSRKLCFSAAQHNTPSQAAPSSHVLPFPFRKEQTQFVVHYKSTTMKTSSSLHPHHHFPSTKFYTSITTRVYIRTQLSFPAKVFLCQAKSGTNGSLNVRVMPPTLLAAEKEEAKAVLMLFLKKEGLSNAIAARTVNKSDPFIDHLVSVLHSKHKSRYLVGRELTTLEIRDALVPYLESLLEEHGDSLVDVVENYPNPPVKEKPAVQVPPPTPIIDSKKLRTVSRVNAIDTTAGNLRPHIVYLIEFGMSIEQINGIIRRFPSFAYYSLEGKIKPVVEFFLELGVPKEDIPTILTKRPQLCGISLSENLKPTMKFLESLGVDKKQWAKVIYRFPALLTYSREKVEESIDFLRESGLSDDNIGKILTRCPNIVSYSVEDNLRPTANYFRSLGVDVGVLLFRCPQNFGLSIEANLKPVTQFFLEKGYTLDEIGTMISRFGALYTFSLSDNLIPKWDFFITMGYPNSELVKFPQFFGYSLEERIKPRYARMKRAGVRLLLNQVLSLSSRNFEEALEKKLKKNSS 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03514 885 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 436 883 - -
Aip10g03514 885 SUPERFAMILY Cytochrome c 160 338 IPR036909 GO:0009055|GO:0020037
Aip10g03514 885 Gene3D - 341 379 - -
Aip10g03514 885 PANTHER CGI-12 PROTEIN-RELATED 436 883 IPR003690 GO:0003690|GO:0006355
Aip10g03514 885 Pfam mTERF 600 717 IPR003690 GO:0003690|GO:0006355
Aip10g03514 885 Pfam mTERF 598 787 IPR003690 GO:0003690|GO:0006355
Aip10g03514 885 Pfam mTERF 708 873 IPR003690 GO:0003690|GO:0006355
Aip10g03514 885 Pfam Cytochrome C1 family 167 337 IPR002326 GO:0009055|GO:0020037
Aip10g03514 885 SMART mt_12 691 721 IPR003690 GO:0003690|GO:0006355
Aip10g03514 885 SMART mt_12 759 790 IPR003690 GO:0003690|GO:0006355
Aip10g03514 885 SMART mt_12 827 858 IPR003690 GO:0003690|GO:0006355
Aip10g03514 885 SMART mt_12 795 826 IPR003690 GO:0003690|GO:0006355
Aip10g03514 885 SMART mt_12 619 650 IPR003690 GO:0003690|GO:0006355
Aip10g03514 885 SMART mt_12 726 757 IPR003690 GO:0003690|GO:0006355
Aip10g03514 885 SMART mt_12 655 686 IPR003690 GO:0003690|GO:0006355
Aip10g03514 885 Gene3D Transcription termination factor 3, mitochondrial 662 882 IPR038538 -
Aip10g03514 885 PRINTS Cytochrome C1 signature 301 312 IPR002326 GO:0009055|GO:0020037
Aip10g03514 885 PRINTS Cytochrome C1 signature 230 250 IPR002326 GO:0009055|GO:0020037
Aip10g03514 885 PRINTS Cytochrome C1 signature 263 287 IPR002326 GO:0009055|GO:0020037
Aip10g03514 885 PRINTS Cytochrome C1 signature 165 184 IPR002326 GO:0009055|GO:0020037
Aip10g03514 885 PRINTS Cytochrome C1 signature 312 331 IPR002326 GO:0009055|GO:0020037
Aip10g03514 885 PRINTS Cytochrome C1 signature 185 204 IPR002326 GO:0009055|GO:0020037
Aip10g03514 885 ProSiteProfiles Cytochrome c family profile. 179 286 IPR009056 GO:0009055|GO:0020037
Aip10g03514 885 Gene3D - 156 340 IPR036909 GO:0009055|GO:0020037
Aip10g03514 885 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 341 375 IPR021157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03514 Aip-Chr10 133577899 133591447 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03514 90 374 Chloroplast and Mitochondria Gene Families AT3G27240 76.898 1.22e-146 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip10g03514 mTERF 7.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03514 K15032 K12177 gmx:100781900 738.799