Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03493 ATGGGTTCTAGGCCTCTGTTGTTACCATCTCCAAGAACTCCAAATAGTATTCAAGAGCTTCCAACCATTCCAGTTTTCTCTGAACAACAAAAGTCAAAGTCAACTTCCTCTGAACACGCAAGCAATGCTGTTATAAACAAAAGCAACTCATCGTCGATCCGCTCCGGCAGCTCCGGAAGGAGCGGCGGCGGCTCCGTCAAGGAAGTGAGTTTCAGCAATTCTTCATCGAAGCCGGTTCGATACGGCTCGTCAAAACGCGGCGGTGGCGGCGAGTCGGAAGGACTCAGCATGTCGCAGAAAGAACTGAGAGACGAAGATGCAAGAATTGTTTACATAAACAACCCGGAGAAGACGAACGAGACTCTTCAGTTCGCAGGGAATTCAATCCGAACCGCGAAATATTCAATCCTCACATTCATCCCTAGAAACCTCTTCGAACAGTTTCACAGAGTTGCGTATATTTATTTTCTCATAATCGCCATTCTCAATCAGCTTCCTCAGCTTGCAGTCTTCGGTAGAGGTGTTTCAATTCTCCCTCTGGCCTTTGTCCTGCTCGTTACCGCCGTCAAAGACGCCTTCGAGGATTGGCGGCGCCACCGCTCCGATAAAGTCGAGAACAACCGGCTAGCGTCGGTTTTGATTAACGGAAGCTTCGTGGAGAAGCCATGGAAGGACATAACCGTCGGCGAAATCGTTAAGATCGCCGCCAACGAAACGATCCCCTGCGATATTGTCCTTCTCTCCACCGCCGATCCTACCGGAGTTGCATATGTTCAGACTATAAATCTTGACGGAGAGTCAAATCTGAAAACTCGCTACGCCAAGCAAGAGACTCAATCCAAACAGAGGTTTGATTTCGGTGGAATAATCAAGTGCGAGAAACCGAATCGGAACATTTATGGATTCCAAGCTAACATGGAAGTTGATGGAAAGAAACTGTCTCTCGCATCATCGAACATTGTGCTTAGAGGATGCGAGCTTAAGAACACAAGCTGGGCTTTGGGAGTTGCTGTTTACTGTGGCAGAGAGACTAAAGCTATGCTCAACAGCTCCGGTGCGCCGTCGAAGAGAAGCCGGCTCGAGACTCGAATGAATTCGGAGATCATCATGCTCTCTTGCTTCCTTGTTGCTTTGTGTACGGTCACGTCCGTTTGTGCTGCGGTTTGGTTGAAGCGCCACAAAGACGAGCTTGATTTGATGCCGTATTACCGGAAGCTGAGCTTCTCCAGTGGAAAACCGAAGAAGTATAAGTATTATGGTTGGTTTTGGGAGATAATTTTCACATTCCTCATGTCAGTTATAGTTTTCCAGGTTATGATTCCAATTTCGTTGTACATTTCGATGGAGCTTGTTCGTGTTGGCCAGGCCTATTTCATGATCAGAGATGATAGAATGTATGATAGGGCTACCAAGTCAAGATTTCAGTGTAGGGCTTTGAATATCAATGAAGATTTGGGGCAGATTAAGTATGTCTTTTCGGATAAAACTGGTACTCTTACTGAGAACAAGATGGAATTCCAGTGCGCCAGCATCTGGGGGGTTGATTACAGTTCGACGAAATCTGGCCTCGAGATTCAACCTGGTGAATACTTCACGCAAGCAGTAGATGGAAAGGTATTGAGGCCAAAGATGAATGTGAAAGTAAATCCAGAGCTTTTGGCATTATCAAGAAGTGGAATTGAGCATAAGGAGGGAAAACGGATCTATGATTTCTTTCTAGCACTGGCAAGCTGCAATACCATTGTTCCTATTATTGTTGATACCCCTGATCATGATGTCAAGCTGATAGATTACCAAGGGGAATCACCAGATGAACAGGCATTGGCATACGCAGCCGCCGCCTATGGTTTTATGCTTATAGAACGAACCTCGGGCCATATAGTCATTGATATTCAAGGAGAAAGACACAGGTTAGTTATGAAAATTTTCGTGAAAGGAGCGGATACGTCTATGCTAAATGTGATAGATAAATCATCTAACATGGACATTATAAGAGCAACTGAAGCTCATCTTTACTCTTATTCCTCAATGGGTTTAAGAACCCTTGTGATTGGAATGAGGGATTTAAATGCTTCAGAGTTTGAGCAATGGCACACTGCCTTTGAGGCAGCGAGCACCTCTTTGTTCGGCAGGGCCGCCATGCTTCGCAAGGTTGCTGTCAATGTAGAGAGAAACCTCTGCATCTTAGGCGCATCGGCTATCGAAGACAAGCTTCAGCAGGGTGTGCCGGAATCCATTGAGTCTCTAAGGACAGCTGGAATAAAAGTATGGGTGCTAACCGGAGACAAACAAGAAACTGCTATATCAATTGGATACTCATCAAAGCTTCTAACAAACAGAATGACTCAAATCATAATCAATAGCAAAAATAGAGAGTCGTGTAGAAAGAGTTTGCAAGATGCCATTGTTTCAAACAAGATTGAAGGAGGTTTTGATGCAATGACAAGTCAGATAGCATTGATCATTGATGGTACTAGCCTTGTATATGTTCTTGATAGTGAACTAGAGGAGCAGTTATTTAAACTTGCAAGTAGATGTTCTGTTGTTCTCTGTTGTCGAGTGGCGCCGCTGCAGAAGGCCGGCATAGTTGCCCTTGTTAAGAAGAGGACAGCCGAAATGACGCTTGCCATTGGAGACGGTGCTAATGATGTCTCCATGATTCAAATGGCTGATGTTGGAGTTGGCATCAGCGGACAAGAGGGCCGGCAAGCCGTAATGGCGTCCGATTTCGCCATGGGCCAGTTTAGGTTTATAGTTCCTCTCTTGTTGATTCATGGACACTGGAATTACCAGCGGCTTGGCTACATGATACTCTACAACTTTTATAGAAATGCTGTCCTTGTTCTTGTCCTATTTTGGTATGTGCTCTACACTGCCTTCACTTTAACAACTGCCATAAATGAATGGAGCACCACGTTATATTCAATAATATACAGCTCATTACCAACAATCATAGTTGGTATTCTTGACAAGGATCTTGGAAAAAGGACTCTCCTCAAGTATCCTCAGCTCTATGGGGCTGGGCAGAGAGATGAGGCATACAACAAGAAGCTATTTATTTTGACAATGCTCGACACTTTATGGCAAAGCATGGTAATCTTTTGGGCACCCCTCTTTGCATATTGGAGCACTGATGTTGATGTTGGAAGCATTGGGGATCTCTGGACACTAGCTGTCGTTATTTTGGTAAATTTACACTTGGCCATGGATGTCTTCAGGTGGAATTGGTTGACTCATTTTTCCATATGGGGGTCAATTGTTGCCACTTTCATTAGTGTCATGGTCATTGATGCTATACCCACGTTTCCTGGCTACTGGGACTTCTTTAATGTTGCAAGCACAGGATTGTTCTGGTTATTGTTGCTTGGAATCATCATAACAGCATTGCTTCCTCGTTTCCTTGTAAAATTCATTTGTCAATATTACTTTCCCAGTGACATTCAGATTTCAAAAGAAGCTGAGAAGATTAATGGGAATCAAATTCAAAGAGAAAATTTTGAAAGAGGACAAATAGAAATGCTTCCTATCTCAGATGTCCCACCAAGATGA 3549 0.4418 MGSRPLLLPSPRTPNSIQELPTIPVFSEQQKSKSTSSEHASNAVINKSNSSSIRSGSSGRSGGGSVKEVSFSNSSSKPVRYGSSKRGGGGESEGLSMSQKELRDEDARIVYINNPEKTNETLQFAGNSIRTAKYSILTFIPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAFEDWRRHRSDKVENNRLASVLINGSFVEKPWKDITVGEIVKIAANETIPCDIVLLSTADPTGVAYVQTINLDGESNLKTRYAKQETQSKQRFDFGGIIKCEKPNRNIYGFQANMEVDGKKLSLASSNIVLRGCELKNTSWALGVAVYCGRETKAMLNSSGAPSKRSRLETRMNSEIIMLSCFLVALCTVTSVCAAVWLKRHKDELDLMPYYRKLSFSSGKPKKYKYYGWFWEIIFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIRDDRMYDRATKSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTKSGLEIQPGEYFTQAVDGKVLRPKMNVKVNPELLALSRSGIEHKEGKRIYDFFLALASCNTIVPIIVDTPDHDVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIQGERHRLVMKIFVKGADTSMLNVIDKSSNMDIIRATEAHLYSYSSMGLRTLVIGMRDLNASEFEQWHTAFEAASTSLFGRAAMLRKVAVNVERNLCILGASAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNRMTQIIINSKNRESCRKSLQDAIVSNKIEGGFDAMTSQIALIIDGTSLVYVLDSELEEQLFKLASRCSVVLCCRVAPLQKAGIVALVKKRTAEMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFIVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSTTLYSIIYSSLPTIIVGILDKDLGKRTLLKYPQLYGAGQRDEAYNKKLFILTMLDTLWQSMVIFWAPLFAYWSTDVDVGSIGDLWTLAVVILVNLHLAMDVFRWNWLTHFSIWGSIVATFISVMVIDAIPTFPGYWDFFNVASTGLFWLLLLGIIITALLPRFLVKFICQYYFPSDIQISKEAEKINGNQIQRENFERGQIEMLPISDVPPR 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03493 1182 SFLD Haloacid Dehalogenase 476 928 - -
Aip10g03493 1182 PRINTS P-type cation-transporting ATPase superfamily signature 752 762 - -
Aip10g03493 1182 PRINTS P-type cation-transporting ATPase superfamily signature 877 896 - -
Aip10g03493 1182 PRINTS P-type cation-transporting ATPase superfamily signature 492 506 - -
Aip10g03493 1182 Gene3D - 183 349 - -
Aip10g03493 1182 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 11 637 - -
Aip10g03493 1182 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 640 1182 - -
Aip10g03493 1182 MobiDBLite consensus disorder prediction 1 101 - -
Aip10g03493 1182 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 11 637 - -
Aip10g03493 1182 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 640 1182 - -
Aip10g03493 1182 SUPERFAMILY Calcium ATPase, transmembrane domain M 123 1144 IPR023298 -
Aip10g03493 1182 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 848 963 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip10g03493 1182 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 422 513 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip10g03493 1182 ProSitePatterns E1-E2 ATPases phosphorylation site. 494 500 IPR018303 -
Aip10g03493 1182 Gene3D - 725 917 IPR023214 -
Aip10g03493 1182 MobiDBLite consensus disorder prediction 9 81 - -
Aip10g03493 1182 CDD P-type_ATPase_APLT_Dnf-like 126 1037 - -
Aip10g03493 1182 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 741 IPR023299 GO:0000166
Aip10g03493 1182 SUPERFAMILY HAD-like 479 917 IPR036412 -
Aip10g03493 1182 Pfam Phospholipid-translocating ATPase N-terminal 110 175 IPR032631 -
Aip10g03493 1182 SFLD p-type atpase 476 928 IPR044492 -
Aip10g03493 1182 SUPERFAMILY Calcium ATPase, transduction domain A 207 346 IPR008250 -
Aip10g03493 1182 Pfam E1-E2 ATPase 210 449 - -
Aip10g03493 1182 Pfam Phospholipid-translocating P-type ATPase C-terminal 905 1145 IPR032630 -
Aip10g03493 1182 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 640 1151 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aip10g03493 1182 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 124 634 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03493 Aip-Chr10 133391000 133396511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03493 67 1182 Primary Pumps ATPases AT5G04930 66.347 0.0 1589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03493 K14802 - gmx:100813836 1762.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03493 10 133391000 133396511 Aip10g03493 10 133391000 133396511 ECH