Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03486 ATGGAAAGGATTCAAGATAAGGCAGATGAAAATAGTATATCTGAGCATTCGCCTTCATCCGTTGTTGCTCTAGCAATTAAGGGTAACAAGAAAAGCAAATTTGTGGTACAGTGGGCACTGAATAAGTTTGTCCCTGAGGGTATGATTGTCTTCAAGCTGATACACGTCCATCCCGGTATAAAAGGAGTTCCAACACCAATGGGAAATGTGATTCCTATTTCACAAGTGCGTACCGATGTAGCAAACGCTTTCAGAAAGGAAGTGGAGTGGCAGACAAATCAAAAGCTTCTACCTTTCAAAAGAATGTGTGAGCAGAGAAAGGTCCATGCAGATATTGTGGTGATTGAATCAGATGACGTGGCAGGTGCAGTAGCAGAGGAAGTAGCTAAGGGTGCTATAACCAAACTCGTCGTTGGAGCATCATCTCGTAGCATATTTACCAGTAAACATAAGGGTATATCTGCAAAAATCTCAGTATGCACTCCAAGATTTTGTACAGTCTATGCTACATCGAAAGGAAAACTGTCCATACGACCATCAGACATACAAGTTGATGATAGCATTATCGATGACACTAGTGGAATCAGTTTTTCCTCCAGCAGCTCATCAAATTACACTTCAACCACTCAGACAGACACTGGCTCGCTTGCATCATATGCTCCTTCGCATTCATCTTCCTTAACTACACAGCGATTCCAAGCTCTTTCAAGTATAAATCAGACATTATTGAAGACAAGTACTGGTTTAATTGAAACTAATCATTCTAGAGGTCGATCTCTAGATTTTGGGAGAGAGAACATTACTTCAACTTCTTCCAGAAACTCTGATATTGATTATGCTTTGAATCGTTCCTCTAGTTACAAAAGCGTTATATCTGATACCGAATCTTTGAATTTTGATCAAAATTCTGCCAAGGAGGAACCATTAGCGATTGAACATCCTTCACCTAATAGGCAGGAAAATGTTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACAAGCCCAAGGATTGCATGCAGTAGCTCAAAGCGAAAGCATAGATGCATCACGAAAGGTAATATCTATTAGCTTGTTTATGGAACCCCAGACCCTCTCATGGATCCGGTTCTTTCTTGAAATCAAATTCTTTCGACTACTATTATCAAGTGGACTAACTAATATCCTTTATTGCTCTGAACAAGAAGCTGCAGAAAGAAAAGAAGCAGAGTTAAAGGCTATCCGTGCGGCTAAAGATAAAGAAAAGCTGGAGGATGCTATTACTGGTTCCACGCCGTTGTACCGAAAGTTTGCGTGGGATGAAATAGTGTCCGCTACCTCATCATTCTCTGAAGATTTGAAAATTGGAATGGGAGCATATGGAAAGGTGTACAAGTGCAGTTTGTATCATACAACTGTTGCTGTTAAAGTTCTTCACCCTAATAGGGGCCACAATAGCAAGCAATTCCAGCAAGAGCTTGAGATACTTAGCAGAACTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCCTGAGCATGGATGCCTTGTGTATGAATATATGGAGAATGGTAACTTGGATGATAGATTACTCCGGAAAAACAATGCCACCCCTATTCCATGGTTTGAGAGGTATCGAATAGCATGGGAAGTTGCATCAGCTCTATCCTTTCTTCACAGTTCGAAGCCAAAACCAATCATCCATCGTGATTTGAAGCCAGCGAACATCCTTCTTGGTCGTAACCTTGTCAGCAAGATTGGTGATATTGGCCTTTCGACAATGCTTCAGTCAGATAATTTATCCACCATGTACAAGGACACTGAGCCTGTTGGGACACTCTGCTACATAGACCCTGAGTATCAAAGAAATGGATTGATATCTCCAAAATCAGATGTTTATGCTTTGGGAATAGTTATATTACAGTTATTGACTGCAAAACCAGCCATAGGAATTACTCATGTGGTTGAAACAGCAATTGGTGCTGGGAAGTTGACGGATATATTGGATCCAGAGGCAGGAAGTTGGCCATTTCAAGAGACATTAGAATTAGCTCAATTAGGACTGAGCTGTGCTGAACTTCGGCGAATAGACCGGCCTGATTTGAAAGATCATGTTCTTCCTAAACTAGAAAGATTGAAAGAAATTGCTGATAGGACTCAAGAATCTCCTTCAATAGTATTTGTTAGATCCAGACCTCCCAATCACTTTATCTGTCCAATACTTCAGGATGTGATGGATGATCCTTGTGTTGCTGCGGATGGATATTCATATGATCGTAAAGCAATTGAAAAGTGGTTTCAAGAGAATGACAAATCACCAATGACAAATATGGCCTTACCACACAAGCATCTAATTCCTAATTACACTCTCCTGTCAGCAATTATGGAATGGAAGTCTCAATAA 2388 0.4054 MERIQDKADENSISEHSPSSVVALAIKGNKKSKFVVQWALNKFVPEGMIVFKLIHVHPGIKGVPTPMGNVIPISQVRTDVANAFRKEVEWQTNQKLLPFKRMCEQRKVHADIVVIESDDVAGAVAEEVAKGAITKLVVGASSRSIFTSKHKGISAKISVCTPRFCTVYATSKGKLSIRPSDIQVDDSIIDDTSGISFSSSSSSNYTSTTQTDTGSLASYAPSHSSSLTTQRFQALSSINQTLLKTSTGLIETNHSRGRSLDFGRENITSTSSRNSDIDYALNRSSSYKSVISDTESLNFDQNSAKEEPLAIEHPSPNRQENVNLELEKLRIELRQAQGLHAVAQSESIDASRKVISISLFMEPQTLSWIRFFLEIKFFRLLLSSGLTNILYCSEQEAAERKEAELKAIRAAKDKEKLEDAITGSTPLYRKFAWDEIVSATSSFSEDLKIGMGAYGKVYKCSLYHTTVAVKVLHPNRGHNSKQFQQELEILSRTRHPNLLLLLGACPEHGCLVYEYMENGNLDDRLLRKNNATPIPWFERYRIAWEVASALSFLHSSKPKPIIHRDLKPANILLGRNLVSKIGDIGLSTMLQSDNLSTMYKDTEPVGTLCYIDPEYQRNGLISPKSDVYALGIVILQLLTAKPAIGITHVVETAIGAGKLTDILDPEAGSWPFQETLELAQLGLSCAELRRIDRPDLKDHVLPKLERLKEIADRTQESPSIVFVRSRPPNHFICPILQDVMDDPCVAADGYSYDRKAIEKWFQENDKSPMTNMALPHKHLIPNYTLLSAIMEWKSQ 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03486 795 PANTHER OS02G0152300 PROTEIN 18 793 - -
Aip10g03486 795 MobiDBLite consensus disorder prediction 197 220 - -
Aip10g03486 795 ProSitePatterns Protein kinases ATP-binding region signature. 449 470 IPR017441 GO:0005524
Aip10g03486 795 SMART serkin_6 443 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03486 795 ProSiteProfiles U-box domain profile. 726 795 IPR003613 GO:0004842|GO:0016567
Aip10g03486 795 SUPERFAMILY RING/U-box 724 794 - -
Aip10g03486 795 CDD RING-Ubox_WDSUB1_like 731 771 - -
Aip10g03486 795 Pfam Protein kinase domain 445 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03486 795 SUPERFAMILY Protein kinase-like (PK-like) 425 698 IPR011009 -
Aip10g03486 795 Pfam U-box domain 728 794 IPR003613 GO:0004842|GO:0016567
Aip10g03486 795 CDD STK_N 21 173 - -
Aip10g03486 795 Coils Coil 398 420 - -
Aip10g03486 795 Gene3D HUPs 10 150 IPR014729 -
Aip10g03486 795 ProSiteProfiles Protein kinase domain profile. 443 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03486 795 Gene3D Transferase(Phosphotransferase) domain 1 516 723 - -
Aip10g03486 795 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 18 793 - -
Aip10g03486 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Aip10g03486 795 Coils Coil 319 346 - -
Aip10g03486 795 SMART Ubox_2 730 792 IPR003613 GO:0004842|GO:0016567
Aip10g03486 795 Gene3D Phosphorylase Kinase; domain 1 421 515 - -
Aip10g03486 795 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 726 795 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03486 Aip-Chr10 133317145 133322557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03486 1 794 U-box Gene Family AT4G25160 49.642 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aip10g03486 Pkinase 6.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03486 - - gsj:114409387 1125.15