Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03479 ATGCATAATATCAATTTTCAATGTCAAGGCAAAGAACTTGAATTGGTTCTAGCATCCATTAATATGTGTTTTGCCATCTGCTTATTTTGCATGTCTGTTCAAAACCTTGAATCAAAGCTAGGTTGTTTTCCTGATGGTTACTCTCTTTCTACAAATGTTAGGTATCCTCATTGCCTCTATTTTCTTGAGCTTCTACAGAATGCAAATTTTCGCAATGCAATGGCACACCCTAACAATAAGGAGCTGGCACATAGACAACAATTCTACTTCTGGAAGAACTACAGGAACAATCGGCTAAAGCACATTTTGCCTAGATCACTTCCTGAACCTACTGCCACAACTGCGCCTCCTGCAGCTTCAACTCCGGCTCAGCCACCTGTGACTGCATTGCCACCAGTACCTGCCACAAATGTTGCAGTGACAGGTTCATCTTCTCAAGCCCCTTCTCCAATGCCATATGGTATGCCCCCTGGATCTGGTCTTGCAAAAAATGACATGAGGAATCCTTCAATGGATAGAAGGAAGCGGAAGTGA 534 0.4288 MHNINFQCQGKELELVLASINMCFAICLFCMSVQNLESKLGCFPDGYSLSTNVRYPHCLYFLELLQNANFRNAMAHPNNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPTATTAPPAASTPAQPPVTALPPVPATNVAVTGSSSQAPSPMPYGMPPGSGLAKNDMRNPSMDRRKRK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03479 177 MobiDBLite consensus disorder prediction 107 177 - -
Aip10g03479 177 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 53 177 IPR008831 GO:0003712|GO:0006355|GO:0016592
Aip10g03479 177 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 44 91 IPR038089 -
Aip10g03479 177 Pfam SOH1 52 94 IPR008831 GO:0003712|GO:0006355|GO:0016592
Aip10g03479 177 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 53 177 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Aip10g03479 Med31 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03479 K15153 - gmx:100527879 187.193