Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03463 ATGTTTCCGGCGGTTTTCACTGTTCTTACGCCCTCTAATCTCTCTGCTTTCATCCCAATCAACACAAGACTCTCAATCTTCTCAAAACCAAATTCCAAACTCTCTCTCCTTCCCAGGGTCAGTAGTAACGGTCCTGATTCCACCTCACAACACTCTTCATCCCTTTCAGGTATTGATGCAGTAGAGAGCACGTCTTCTGGCCTTGGTGATGGTTATGTGGCCTTATTTGTCCGTATGTTAGGCCTAGATCATGATCCTCTGGATAGAGAGCAAGCTATAATTGCTCTCTGGAAATATTCACTTGGTGGAAAGAAGTGTATTGACACTATAATGCAATTTCCTGGTTGTATTAATCTTATTGCAAACCTCCTTAGATCAGAGTCTAGTGCAACATGTGAGGCAGCTGCAGGTCTTTTGCGATCAATATCTTCAGTCAATCTATATAGGAATGCTGTAGCAGATAGTGGAGCAGTAGAAGAGATAAATAGATTGTTGAGGCAATTGTCCTTGGCCACTGAGGTGAAGGAGCAGAGTATGGGTACACTCTGGAATTTATCTGTTGATGAGAATCTCTGCAGGAGAATGGCAAAGAGTGACATTCTACCATTATCTATTAAATACCTTGATGATGAGGATATGAAAGTAAAGGAAGCTGCAGGAGGCATTTTGGCAAATTTAGCATTGAACCGCAATAATCATGACGCGATGGTTGAATCAGGTGTTATACCAAAATTGGCAAAGTTCTTAATATCTAATTCAGAAGGTTCTAAAGTTATTAAAAAGGAAGCAAGAAATGCATTGTTGGAACTTGTTAAGGATGATGATTATTATAGAATTCTTGTTATTGAAGAAGGACTGGTTCCTGTGCCATTAATTGGTGCTGCAGCATATAAATCATTCACCCCACGATTACATGCGTGGCCCACACTACCAGATGGAACTGAAATTGAAAAGACTCCTGGACGAAATTCCAAATTTGGTGCATCAGAATTACTTCTTGGATTAAATATTGATGACAAGAATGCTAACATAGATGAAGCAAAAGTCAATGCAATCATTGGACGGACACAACAGCAATTCCTTGCTCGTATTGGGGCTATAGAAATGGAAGAGAAGACGGTATCTGAATGTTCAAATGATCAGCTGCTTACACTTTTGCCTTGGATGGATGGTGTTGCTCGTTTGGTGCTGATATTAGAACTTGAAGATAAGTCTGCAATTGTAAGGTCTGCTGAGTCAATTGCTGGTGCATGTATCAATGAACATATGCGCATTGCATTTAAGGAGGCTGGAGCAATTAAACATTTAGTACGTCTTTTGAATTGTGATCATAATGAGGTCCAATTTGCTGCAATACAAGCTTTGGAAAGGCTGTCTGCTAGCAATATTGTTTGCCGGATGATTGAAGCTGAGGGTGTTTTACATCCTTTAATCAGTATTTTAAAGTCCTCAGAAATAGCTGAACCTGTTGTGGAGAAGTTGCTTCTGCAGGCTCTGAACATAGTCGCTCAGATACTAGACCCCAGTAAAGAGATGCATTTGAAGTTTTATGACGGACCAGTTAATGGATCTGAGAAGATGTTTGACACAGCGAAAAGTGAAATTCCAGCTGGGTTAAGAACTGAACAAGCCATATCAGAAACAAACTCCAGGAATGCTATACTGGAATCTGATTTCATTGCACGTCTTGTTGAGATTCTGAAGTCCTCTTCACCCAGTTTACAAGAAAAAGCTGCATCTGTGCTCGAGTTTGTTGCACTAGCTGACCAAACGTTGGCCTCTGTTATTTCTGCAGATATTGAATCTGGTCTCAACTCTGTTTTTCAGCAAAAGCTTCTGAAAATTTCAGCGGACATGGAATCTGATGTTGAAGAGCAATTTTCAGAAGCATACACAATTGAATTCGAAGAAGCCGGTCGTGCCATATCTGCAGCATCCCGGCTGATGACAAGACTACTCGATAATGAGCAGTTCCGGCACAAAACAGATTCCTCCCATTTCATCGGCTTGCTTCGTGAAATACTCCGGTCGAGGATCCCTCTCTATCACAAAGATTGGGTAGCTGCTTGCCTTGTCAAACTTAATTTTCTCTCTAGTTCCAACACTTCTTCTGATCCAATCAATGTGGAAGTTACACTTTATGAGACAATTCCGAGGCTTCTGGAACAGATTAAAAATTCGTTTTCTCGAGAAACACAGGAAAATGCTGTAGTGGAACTCAACAGAATAGTGTCTGAAGGAGTGGTGGATTCCAGTGGAGCTATTATTTCCGAGGGAGCGATTTATCCATTGGTGAAGCTGATTGAAGAAGGGAGTGAAAAGGCAGTTGAGGCAAGCTTGGCAATACTGTACAATCTGAGTATGGACAGCGACAACCATTCGGCAATCGTGGTGGCCGGAGCAGTCCCGGCCTTGAGACGAATTATTCTGGCTCAGAGACCGCATTGGGAACGAGCCCTTCGTCTGCTTAGAAATTTGCCAACATGA 2487 0.417 MFPAVFTVLTPSNLSAFIPINTRLSIFSKPNSKLSLLPRVSSNGPDSTSQHSSSLSGIDAVESTSSGLGDGYVALFVRMLGLDHDPLDREQAIIALWKYSLGGKKCIDTIMQFPGCINLIANLLRSESSATCEAAAGLLRSISSVNLYRNAVADSGAVEEINRLLRQLSLATEVKEQSMGTLWNLSVDENLCRRMAKSDILPLSIKYLDDEDMKVKEAAGGILANLALNRNNHDAMVESGVIPKLAKFLISNSEGSKVIKKEARNALLELVKDDDYYRILVIEEGLVPVPLIGAAAYKSFTPRLHAWPTLPDGTEIEKTPGRNSKFGASELLLGLNIDDKNANIDEAKVNAIIGRTQQQFLARIGAIEMEEKTVSECSNDQLLTLLPWMDGVARLVLILELEDKSAIVRSAESIAGACINEHMRIAFKEAGAIKHLVRLLNCDHNEVQFAAIQALERLSASNIVCRMIEAEGVLHPLISILKSSEIAEPVVEKLLLQALNIVAQILDPSKEMHLKFYDGPVNGSEKMFDTAKSEIPAGLRTEQAISETNSRNAILESDFIARLVEILKSSSPSLQEKAASVLEFVALADQTLASVISADIESGLNSVFQQKLLKISADMESDVEEQFSEAYTIEFEEAGRAISAASRLMTRLLDNEQFRHKTDSSHFIGLLREILRSRIPLYHKDWVAACLVKLNFLSSSNTSSDPINVEVTLYETIPRLLEQIKNSFSRETQENAVVELNRIVSEGVVDSSGAIISEGAIYPLVKLIEEGSEKAVEASLAILYNLSMDSDNHSAIVVAGAVPALRRIILAQRPHWERALRLLRNLPT 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03463 828 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 199 241 IPR000225 GO:0005515
Aip10g03463 828 Pfam Armadillo/beta-catenin-like repeat 420 460 IPR000225 GO:0005515
Aip10g03463 828 Gene3D - 377 609 IPR011989 -
Aip10g03463 828 Gene3D - 611 828 IPR011989 -
Aip10g03463 828 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 828 - -
Aip10g03463 828 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 431 462 IPR000225 GO:0005515
Aip10g03463 828 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 156 189 IPR000225 GO:0005515
Aip10g03463 828 Gene3D - 67 308 IPR011989 -
Aip10g03463 828 SMART arm_5 103 144 IPR000225 GO:0005515
Aip10g03463 828 SMART arm_5 145 187 IPR000225 GO:0005515
Aip10g03463 828 SMART arm_5 420 460 IPR000225 GO:0005515
Aip10g03463 828 SMART arm_5 748 788 IPR000225 GO:0005515
Aip10g03463 828 SMART arm_5 461 507 IPR000225 GO:0005515
Aip10g03463 828 SMART arm_5 229 272 IPR000225 GO:0005515
Aip10g03463 828 SMART arm_5 188 228 IPR000225 GO:0005515
Aip10g03463 828 SMART arm_5 789 828 IPR000225 GO:0005515
Aip10g03463 828 SMART arm_5 546 587 IPR000225 GO:0005515
Aip10g03463 828 SMART arm_5 703 745 IPR000225 GO:0005515
Aip10g03463 828 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 759 801 IPR000225 GO:0005515
Aip10g03463 828 SUPERFAMILY ARM repeat 76 518 IPR016024 -
Aip10g03463 828 SUPERFAMILY ARM repeat 394 814 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03463 115 303 U-box Gene Family AT2G23140 30.396 5.14e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03463 - - lang:109360684 1164.06