Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03443 ATGGTTAGAATCAAATGTATCCACACTGTAATTCCTACCGAAGCTACCCCAAATGGCACTTTGTTGCTCTCTGAGAGTGAGCAAATCAATGCTCATACTCATGCACTCACAATTTACATTTACCGTGCAAATCACGATCACAACCACTACAATATCATTGACACAATCAAACACTCCCTTGGCAACATCTTGATTCTTTACTACCCTCTCGCCGGCCGCCTTCGCATGATTGAAGGCGGAAGAATGGAAATTGACTGTAACGGGGAGGGTGTAATGCTGTTCGAAGCGGAGTCCCTGAAAACATTGCAAGACTACGGTGATTTCGTGCCCAGGGCCGCCTTGAGGCCGCTTCTGCCGACGGTTGATTACCGTGAGCCTGTGGAAAACATTCCTCTTGTTCTGGTGCAGGTGACGAGATTCGCGTGTGGTGGCCTGTGTGTTGGGTTTGGAGTTTCCAATGTCGTTGTGGATGGAATCTCTGGCACTGTCTTCGTTGACGCTTGGGCTAAGCTTGCTCGAGGTGGCACTTTGGGAGAAGATGAGAAGCCAATTCTTGATAAAATGGTGATTCTAAAATCTGAGTTTATCGGACCGCGTTTTGTGCACCGTGAATTCAAGCCACTTCCGCTGATAATTGGTAGCTCTGACGTCAGTGAGGAGAGCAAGAAGGAAACAGATCTTGCAATTCTGAAGCTCACAAGGGAGATGGTAGAAAAGCTGAGGAAGAAAGCCAATGACGACGGATGCTTGGAATTTGGTTACGAGGAGCCAGTTACGCCGCAGAATCACCATCGACCCTACAGCAGGTATGAAAGCATTGCCGCTCATATCTGGAGGTGTGCATGCAAGGCACGCCACGTGGATCACAACCAACCCACGGTGGTCCTCACTGTCGCCGGCGTCCGAAACAGGCTAAAGCCACCTCTCCCTCTAAACTATTTCGGGAACGCGACGCACCCAACTGTGACCCCCACATGCCTCAGCGGGGAAATTGCTTCAAAGCCACTAAGATATGGTGCGCAAAAGATAAGAGAAGCGATCGAGTTGCTAACAGATGAGTACCTGAGATCAGCCTTTGAGTTCATTGGGAGGCAGGACCATGTAGGGTGGCTGAGGCCAAAGCTTAACAGTGAACCACCATTTCTTGGGAATCCAAACCTCAACATTTGGAGTTGGATGAGTAACATGCCTACCTATGGACCTGATTTTGGATGGGGAAGGCCGCTGTATATGGGACCCTGTGAGGTCGTCGGAGACGGCAGGGCGTTTATCATGCCAGCTCCCACCGGAGATGGGACTCTTTCCGTTGTCATTCGCTTGCAGACTCCTCATCTTCAACCATTTGAGAAGTTCTTCTACGAGGACATATAG 1371 0.4967 MVRIKCIHTVIPTEATPNGTLLLSESEQINAHTHALTIYIYRANHDHNHYNIIDTIKHSLGNILILYYPLAGRLRMIEGGRMEIDCNGEGVMLFEAESLKTLQDYGDFVPRAALRPLLPTVDYREPVENIPLVLVQVTRFACGGLCVGFGVSNVVVDGISGTVFVDAWAKLARGGTLGEDEKPILDKMVILKSEFIGPRFVHREFKPLPLIIGSSDVSEESKKETDLAILKLTREMVEKLRKKANDDGCLEFGYEEPVTPQNHHRPYSRYESIAAHIWRCACKARHVDHNQPTVVLTVAGVRNRLKPPLPLNYFGNATHPTVTPTCLSGEIASKPLRYGAQKIREAIELLTDEYLRSAFEFIGRQDHVGWLRPKLNSEPPFLGNPNLNIWSWMSNMPTYGPDFGWGRPLYMGPCEVVGDGRAFIMPAPTGDGTLSVVIRLQTPHLQPFEKFFYEDI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03443 456 Gene3D - 214 455 IPR023213 -
Aip10g03443 456 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 456 - -
Aip10g03443 456 Pfam Transferase family 2 454 - -
Aip10g03443 456 Gene3D - 1 207 IPR023213 -
Aip10g03443 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03443 Aip-Chr10 132984521 132987232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03443 2 454 Monolignol Biosynthesis Gene Families AT5G48930 35.762 1.87e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03443 K13065 - gmx:100779652 559.681