Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03442 ATGAAGAAAATTCTCATCTTTATGGTGGGTTTATTGCTGTTGAACTGCTGGGTAGCCTTGGCAGATGCAGAGTACTTGAAATATAAAGATCCAAAACAGCCTTTGAATGTTCGAATCAAGGATCTCATAAACAGAATGACTTTGGAGGAGAAGATTGGCCAAATGGTGCAGATTGATCGCACTGTTGCATCAGCTAATGCCATTAACAAGTACTTTATAGGGAGTGTGCTAAGTGGGGGAGGAAGTGTTCCAAAGAAGCAGGCTAGTGCAGAGGATTGGATTAAGATGGTGAATGATTTTCAAAAGGGTGCTTTATCAACAAGGCTGGGAATTCCTATGATTTATGGAATTGATGCTGTTCATGGCCATAACAATGTCTACAAAGCAACCATTTTTCCTCACAACATTGGGATGGGAGCTACTAGCAGGGACCCAGAACTTGTGAAGAAGATTGGAGAAGCAACTGCACTTGAAGTTAGAGCTACCGGAATTCCATATGTGTTTGCACCGTGCATTGCGGTTTGTAGAGATCCAAGGTGGGGTCGCTGCTATGAAAGTTACAGTGAAGATCCTACACTAGTCCAAGCTATGACAGAGATCATTCCCGGATTGCAAGGTCAAATCCCTGCAAATTCACGCAAGGGTGTTCCCTTTGTTGCTGGAAAAAAGAATGTAGCAGCTTGTGCTAAACACTATGTTGGAGATGGAGGAACCACAAAAGGAATCAATGAGAACAACACAGTGATAGATAGACATGGATTGCTTAGCATTCACATGCCAGGCTACTATAACTCAATCATCAAGGGAGTGTCTACTGTCATGGTTTCTTTCTCAAGCTGGAATGGAGTTAAGATGCACGCTAACCGTCAACTAGTCACTGGCTTCCTCAAAAACACACTTCGTTTCAGGGGTTTTGTTATATCAGATTGGCAGGGAATTGATAGGATTACTTCCCCTCCTCATGCCAACTATACATATTCCATTCTTACTGGAATTACTACTGGAATTGACATGGTAAACATTGACATTTTAAATTCTTTAATTTTATATTGCTCAAGCCATGCTTTCTCATTGGGTGTGGTAATCCTGCAGATAATGGTTCCTTTCAACTACACAGAATTCATAGATGGCCTAACCTCTCTAGTGAAACATAATTTCATACCCACGAGTCGAATTGATGATGCAGTGAGGAGAATTTTAAGGGTTAAGTTCATGATGGGCCTTTTTGAGAATCCACTCGCTGATTACAGCTTAGTCAACCAACTTGGGAGACAGGAGCATAGAGACTTAGCTAGAGAAGCTGTAAGGAGATCATTAGTATTGTTAAAGAATGGTCAATATGCACATAAACCATTGCTTCCTCTTCCTAAGAAGGCTTCAAAAATACTTGTTGCCGGAAGCCATGCTGATAATCTTGGTTATCAGTGTGGTGGTTGGACCATTGATTGGCAAGGACTAAGTGGAAACAATCTTACCACTGGCACAACTATTCTAAGTGCTATTAGAAACACTGTTGATAAAGACACTAAGGTGGTTTACAAGGAGAACCCTGACTTGGAGTATGTGAAGTCCAATGATTTTTCATATGCAATTGTGGTAGTTGGAGAGCATCCATATGCAGAGACATTTGGAGACAGCTTGAACTTGACAATAGCAGATCCTGGTCCACAAACCATAACAAATGTGTGTGGAGGAGTGAAATGTGTTGTTGTAGTAATCTCTGGTCGCCCTGTGGTTATACAGCCATATCTTGACACCATTGAAGCACTTGTTGCTGCATGGCTTCCAGGAACAGAGGGTCAAGGTGTTGCTGATGTCTTGTTTGGTGATTATGGTTTCACTGGCAAGCTTCCAAGAACATGGTTTAAGACAGTTGATCAGTTACCTATGAATGTTGGGGCAGAGTATTTGAAATACAAAGATCCAAAACAGCCATTAAATATTAGAATCAAGGATCTTATGAAAAGGATGACTTTGGAAGAGAAAATTGGCCAAATGGTGCAGATCGAACGCACTGTTGCTTCTGCTGATGTCATCAAGAACTATTTCATTGGGAGTGTGTTGAGTGGAGGTGGAAGTGTTCCAAAAGTCAATGCAACTGCTGAGGATTGGGTTGACATGGTGAATGAACTTCAAAAGGGTGCTTTATCAACAAGGCTGGGAATTCCATTAATTTATGGAATTGATGCTGTTCATGGCCATAACAATGTTTATAAAGCAACGATTTTTCCTCATAATGTTGGGCTAGGAGCTACTAGGGACCCAGCACTTGTGAGGAAGATTGGGGAAGCAACTGCTCTTGAAGTTAGAGCTACCGGGATTCCATATGCGTTCGCACCTTGCATTGCGGTGTGTAGGGATCCAAGGTGGGGAAGGTGTTATGAAAGTTATAGCGAAGATCATAGGATAGTCCAAGCTATGACAGAGATCATCCCTGGATTGCAGGGTGAAATCCCTGCAAACTCTCCCAAGGGTGTTCCCTATGTTGCTCCTGGAAAAACAAAAGTTGCAGCTTGTGCTAAACACTTTGTTGGTGATGGAGGAACCACAAAAGGGATCAATGAGAACAACACAGTGATAGATAGACATGGATTGCTTAGCATTCACATGCCAGCCTATGATAACTCAATTATTAAGGGTGTTGCAACTGTCATGGTCTCTTACTCAAGCCTCAATGGAGTTAAGATGCATGCTAACCGTGATTTAGTCACTGGTTTCCTCAAGAAGACACTTCGTTTCAGGGGTTTTGTGATATCTGATTATCAAGGCATTGATAGGATTACTTACCCTCCTCATGCTAACTACACATATTCTGTTCTAGCTGGAGTAAATGCTGGAATTGACATGGTCATGATTCCATTTACTTACAAAGAATTCATAGATGACTTAACTTCTTTGGTGAAAAATAATTTTGTACCCATGAGTAGAATTAACGATGCAGTGGAGAGAATTTTAAGGGTTAAGTTTGTGATGGGTCTTTTTGAGAATCCACTTGCTGATTACAGCCTCGTCAACCAGATTGGAACTCAGGAGCATAGAGAATTGGCTAGGGAAGCTGTGAGAAAATCTCTGGTGCTGTTGAAGAATGGTGAAAATGGTGATGAACCATTGATTCCTCTTCCTAAGAAAGCATCAAAGATTCTTGTTGCTGGAAGCCACGCTGATAATCTTGGCTTTCAATGTGGTGGTTGGACCATTACTTGGCAAGGACAAGGTGGCAACAACATTACTAAAGGTACAACAATTCTTAGTGCTATTAAAAACAGTGTTGACAAAGACACAAAGGTAGTTCACAAGGAGAACCCAGATCTAGAGTATGTGAAGTCAAATAATTTCTCATATGCCATTGTTGTGGTTGGAGAGGAGCCATATGCAGAAACAAAGGGTGACAGCAAGAACTTAACAATCTCTCACAATGGATATGACACTATAAAGAATGTGTGTGGAGGAATCAAATGTGTTGTTGTAGTAATCTCTGGTCGCCCATTGGTTATGCAACCATATCTTGACACCATTGATGCACTTGTTGCTGCATGGCTTCCAGGAACAGAGGGACAAGGTGTTGCTGATGTTCTGTTTGGTGATTATGGTTTCACTGGCAAGCTTTCAAGAACATGGTTCAAGACTGTTGATCAGTTACCTATGAATGTTGGTGATTCTCATTATGATCCTCTCTTCCCCTTTGGATTTGGCCTCACTACCAAACCTGTTAATTAA 3717 0.4138 MKKILIFMVGLLLLNCWVALADAEYLKYKDPKQPLNVRIKDLINRMTLEEKIGQMVQIDRTVASANAINKYFIGSVLSGGGSVPKKQASAEDWIKMVNDFQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNIGMGATSRDPELVKKIGEATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPTLVQAMTEIIPGLQGQIPANSRKGVPFVAGKKNVAACAKHYVGDGGTTKGINENNTVIDRHGLLSIHMPGYYNSIIKGVSTVMVSFSSWNGVKMHANRQLVTGFLKNTLRFRGFVISDWQGIDRITSPPHANYTYSILTGITTGIDMVNIDILNSLILYCSSHAFSLGVVILQIMVPFNYTEFIDGLTSLVKHNFIPTSRIDDAVRRILRVKFMMGLFENPLADYSLVNQLGRQEHRDLAREAVRRSLVLLKNGQYAHKPLLPLPKKASKILVAGSHADNLGYQCGGWTIDWQGLSGNNLTTGTTILSAIRNTVDKDTKVVYKENPDLEYVKSNDFSYAIVVVGEHPYAETFGDSLNLTIADPGPQTITNVCGGVKCVVVVISGRPVVIQPYLDTIEALVAAWLPGTEGQGVADVLFGDYGFTGKLPRTWFKTVDQLPMNVGAEYLKYKDPKQPLNIRIKDLMKRMTLEEKIGQMVQIERTVASADVIKNYFIGSVLSGGGSVPKVNATAEDWVDMVNELQKGALSTRLGIPLIYGIDAVHGHNNVYKATIFPHNVGLGATRDPALVRKIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDHRIVQAMTEIIPGLQGEIPANSPKGVPYVAPGKTKVAACAKHFVGDGGTTKGINENNTVIDRHGLLSIHMPAYDNSIIKGVATVMVSYSSLNGVKMHANRDLVTGFLKKTLRFRGFVISDYQGIDRITYPPHANYTYSVLAGVNAGIDMVMIPFTYKEFIDDLTSLVKNNFVPMSRINDAVERILRVKFVMGLFENPLADYSLVNQIGTQEHRELAREAVRKSLVLLKNGENGDEPLIPLPKKASKILVAGSHADNLGFQCGGWTITWQGQGGNNITKGTTILSAIKNSVDKDTKVVHKENPDLEYVKSNNFSYAIVVVGEEPYAETKGDSKNLTISHNGYDTIKNVCGGIKCVVVVISGRPLVMQPYLDTIDALVAAWLPGTEGQGVADVLFGDYGFTGKLSRTWFKTVDQLPMNVGDSHYDPLFPFGFGLTTKPVN 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03442 1238 Gene3D - 21 423 IPR036962 GO:0004553|GO:0005975
Aip10g03442 1238 Gene3D - 649 1005 IPR036962 GO:0004553|GO:0005975
Aip10g03442 1238 Pfam Glycosyl hydrolase family 3 C-terminal domain 1024 1233 IPR002772 GO:0004553|GO:0005975
Aip10g03442 1238 PRINTS Glycosyl hydrolase family 3 signature 836 852 IPR001764 GO:0004553|GO:0005975
Aip10g03442 1238 PRINTS Glycosyl hydrolase family 3 signature 906 924 IPR001764 GO:0004553|GO:0005975
Aip10g03442 1238 PRINTS Glycosyl hydrolase family 3 signature 743 762 IPR001764 GO:0004553|GO:0005975
Aip10g03442 1238 PRINTS Glycosyl hydrolase family 3 signature 789 805 IPR001764 GO:0004553|GO:0005975
Aip10g03442 1238 PRINTS Glycosyl hydrolase family 3 signature 719 735 IPR001764 GO:0004553|GO:0005975
Aip10g03442 1238 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 1024 1233 IPR036881 GO:0004553|GO:0005975
Aip10g03442 1238 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 439 634 IPR036881 GO:0004553|GO:0005975
Aip10g03442 1238 SUPERFAMILY (Trans)glycosidases 637 1023 IPR017853 -
Aip10g03442 1238 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 12 634 - -
Aip10g03442 1238 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 634 1237 - -
Aip10g03442 1238 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 634 1237 - -
Aip10g03442 1238 Pfam Glycosyl hydrolase family 3 N terminal domain 47 402 IPR001764 GO:0004553|GO:0005975
Aip10g03442 1238 Pfam Glycosyl hydrolase family 3 N terminal domain 658 987 IPR001764 GO:0004553|GO:0005975
Aip10g03442 1238 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 12 634 - -
Aip10g03442 1238 Gene3D - 1009 1235 IPR036881 GO:0004553|GO:0005975
Aip10g03442 1238 Gene3D - 424 648 IPR036881 GO:0004553|GO:0005975
Aip10g03442 1238 Pfam Glycosyl hydrolase family 3 C-terminal domain 439 635 IPR002772 GO:0004553|GO:0005975
Aip10g03442 1238 SUPERFAMILY (Trans)glycosidases 26 438 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03442 Aip-Chr10 132973199 132982382 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03442 11 646 Glycoside Hydrolase AT5G20950 70.912 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03442 K05349 K01188 egt:105956838 1773.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03442 10 132973199 132982382 Aip04g03511 04 129551227 129552183 PCT