Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03424 ATGGCTGAGCCACAAGGCGGTGGTGCTGAAGGAAGCAGGCGTAGAAGCACTAGTGCCGCAAGGCGTGGCGCGGCGGCGCCAACGCAAGAGGGAGCGCCGCCGCCATCTCCGAGTAGTCCATGCGGGGCTTGCAAGTTCTTGAGGAGGAAGTGTGTTGCAGGGTGCATCTTTGCACCCCACTTTAGCTCGGACCAAGGTGCCGCTAAGTTTGCGGCGGTTCACAAGGTGTTTGGTGCTAGCAATGTGTCGAAGCTTTTGTTGCATGTTCCGGCACACCGCCGCAATGAAGCGGTGGCGACTATTTGTTACGAGGCTCAGGCAAGGCTATCTGATCCGGTTTATGGTTGTGTGTCCACCATTCTCTCTTTGCAACAACAGGTGGCATCTTTGCAAGCAGAGGTGGCTATGACTCAAACTCAAGTGATGAATGGAAGGATTGCATATGCAAGTGTTCTTGACACCACCCAGCAGCAGCAGCAGCCGCAACAACAAGCACTACAGCATCACCACCCAAACATGATGATCAACAATTTGGGGCTGTATCCAGCATTCTCAAACAGCTCATCTGCCTCCACAACTAACCTTATGAACATCACCAACTTCAACCCTGCTACCGGTGGTTTCGACCTCTCAATGGAGGCGGCAACAGCACCCTCATCGTCTCACAGCATTCATCCACTTCATCATAATAGCAATTTCTCTCGCTTGTCTCAATATGATGATGATGATGAACAAGAAAGCAAGATTCCTCCGGTCTTTAACCCTGATCTGTAG 774 0.5181 MAEPQGGGAEGSRRRSTSAARRGAAAPTQEGAPPPSPSSPCGACKFLRRKCVAGCIFAPHFSSDQGAAKFAAVHKVFGASNVSKLLLHVPAHRRNEAVATICYEAQARLSDPVYGCVSTILSLQQQVASLQAEVAMTQTQVMNGRIAYASVLDTTQQQQQPQQQALQHHHPNMMINNLGLYPAFSNSSSASTTNLMNITNFNPATGGFDLSMEAATAPSSSHSIHPLHHNSNFSRLSQYDDDDEQESKIPPVFNPDL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03424 257 Coils Coil 120 140 - -
Aip10g03424 257 MobiDBLite consensus disorder prediction 217 234 - -
Aip10g03424 257 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 247 - -
Aip10g03424 257 MobiDBLite consensus disorder prediction 217 257 - -
Aip10g03424 257 Pfam Lateral organ boundaries (LOB) domain 40 138 IPR004883 -
Aip10g03424 257 MobiDBLite consensus disorder prediction 1 39 - -
Aip10g03424 257 MobiDBLite consensus disorder prediction 235 249 - -
Aip10g03424 257 ProSiteProfiles LOB domain profile. 39 141 IPR004883 -
Aip10g03424 257 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 13 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03424 Aip-Chr10 132804791 132806822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03424 1 247 AS2 family AT3G03760 49.042 3.13e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip10g03424 LOB 2.8e-38 No_clan