Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03411 AtgAAAGAAATCACACAAACCCAGACAAAAAACCCTAGCACTGTAAGCCTACACCACCGCCGCAAGGAGTGGCATACTGCCGACGTCCGTCGCACTCAAAGTTCGCCATCCGTCCGTCTATCTATCTTCCCTCGTGCTCCAATTCTTCAACCCCTGTTCGCTGTCACCGATCGCCGCTGCTTCCTCGAGCTCGGCGTCCGTCGTCTTTGTCTGCTCAGCCGCGCTTCCGTCGCCGTTTGTTTGCCGTTCACGTTCGCATCTTCGTTCAGCTGTCGTCTTCGTTCGCGTTCTTCCCCGTTCACGTTCACGTTCACTCGCCGTTCACCATTCGAGTTCTCATTCGCGTTCGTCTGGAAGCCACTTTGCTCTGCTTCAAACTCTGCGACCAACCCGCGCGCTCCACCTAGCCGTCGAACTGCTCTCTTTTGTCGCCACCACCCCGAACCCCCCACTCCCAAAAAACTACCGCATCCCACACCATCTCCGCCACATCTTCTCAACTCCACCGACCATAGCTACCGCCTTCTTCTCCGATTTATATTTGTTTTTATCTTATTGGTAAAGAAGTGTGGCAAAGAGCTCTATTTGACCAGAAAAAGAAATAAAAGGACAAGACGAATAATGGTGTATTGTGATCACTGTGTCCAAAATGTTAGTGCGTTGAGAACTGATTATGGTTCTTTATGTTGTGGCACATGTGGTAAGGTGTTGCAAGATTATCTTTTTTCTGAAGAGGCCACATTTGTGAAAAATTCATCTGGACAGAGCCAATTATCTGGCCATTATGTCAGAACAATTCAAAGCGAATTCTCTGCCTCACGTCAAAGGACTATAGATAGAGCTTTTGAGGAGATCAAATACTTAAGTTATGGCCTTGGAGTGAACGATGATAACATGACCGTGCAAGCTGTGGCCTTTTATAGAATAGCACTTGAGCGGAATTTTACCCGGGGACGTAAATCAGAGCAAGTGCAGGCTGCTTGTCTTTATATTGCATTCCGGGAAAATAATAAGCCATACCTTCTCATTGATTTTTCAAATTATTTAAGGATAAATGTTTATGTTCTAGGTGCAGTTTTTTTACAGCTGTGTAAAGTATTAAGGCTCGAAGAGCACCCAATTGTTCAGAAGCCTGTTGATCCCAGTCTTTTTATTTATAAATACACAAATAATTTGTTAAAGGAAAGGAACTTGGTTGTCTCTGAAACCGCGCTGAGTATTATTGCTAGCATGAAACGTGACTGGATGCAGACAGGGAGAAAGCCAAGCGGATTATGTGGTGCAGCATTATATATGTCTGCTCTTGCAAATGGTTTTAAGTGCTCTAAGTCAGACATTATTGAGGAGTTGAATACAATGGCAAAAGAGCATGAAAAGCAGCCAATTAAAGTACCAAATGGTGAATTGAACAAATGTACTTCCGAAGATCTACTATGTGAGCACAAGGGTACTGCTGTGCCTTATTTTGCACTTGGATTGTGTGAAACATGTTACAAGGATTTTGATAAACTCTCTGGTGGACTTGATGGTGGCTTGGATCCTCCTGCTTTCCAGCGTGCTGAGAGGGAGAGAAGGGTAAAATCAGATTCTGAGGAAAGTGCCAATAGAACAGATGATATGGTGAAAGCATCAAATGGTGAACATGGAAGCCAAAAAGAGGGATTACATGCCTCAGAGCCAAAAAGTGTTGGAGATAATTATGAGCACACAGCCACTAAAGATGGCAACCTTGATGAATCACATGAAGATGATATGAAGACTAAAACTCATGATGACTCAGAAAGTTTATCTGATATTGATGATCTAGAGGTTGATAGCTACCTTCACAATGAGGAGGAAAAACATTACAAGAAGATTATATGGGAAAATATGAATCGAGAATATCTTGAGGAACAAGCAGCTAAGGAAGCAGCTGCTGCAGCTGCTAAGAAATTTGCTGAGGCAAATTGTTCCGAAGAGGAGCTAGCAGCAAGAGAATTTGCGAAATCGGCTGCTGATGCTGTGGCAAAGTCCAGAAAGGAAATGAGACAAAAACGAGCTCAAGAGGCCAAAAATTCTGGTCCTGCTCAATCTGCTATAGAGGCCACCCGGCAGATGTTGAGAACAAAGAGGCTCAGCTCCAAAGTCAATTATGATCGCTTAGAAAAGCTATTTGGTGATCCTGTATCTACAGAAAATCCCAAGAAAGTACGATTTGATCCATCTTTGGACAACGATGAAAATACAGAATCCAAATTAGAGGAAAAACTAAAGGATGATGATGCAGTAGGAGTAGAAGATGAAGTTGAGGATGGTGACATGACTGGAGAATATGAAGATAATATGTATCAGGAAAATGGAGATGAGGCATATGAGGATGAATATTATGACGATGGTGATTATTGA 2385 0.4302 MKEITQTQTKNPSTVSLHHRRKEWHTADVRRTQSSPSVRLSIFPRAPILQPLFAVTDRRCFLELGVRRLCLLSRASVAVCLPFTFASSFSCRLRSRSSPFTFTFTRRSPFEFSFAFVWKPLCSASNSATNPRAPPSRRTALFCRHHPEPPTPKKLPHPTPSPPHLLNSTDHSYRLLLRFIFVFILLVKKCGKELYLTRKRNKRTRRIMVYCDHCVQNVSALRTDYGSLCCGTCGKVLQDYLFSEEATFVKNSSGQSQLSGHYVRTIQSEFSASRQRTIDRAFEEIKYLSYGLGVNDDNMTVQAVAFYRIALERNFTRGRKSEQVQAACLYIAFRENNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIYKYTNNLLKERNLVVSETALSIIASMKRDWMQTGRKPSGLCGAALYMSALANGFKCSKSDIIEELNTMAKEHEKQPIKVPNGELNKCTSEDLLCEHKGTAVPYFALGLCETCYKDFDKLSGGLDGGLDPPAFQRAERERRVKSDSEESANRTDDMVKASNGEHGSQKEGLHASEPKSVGDNYEHTATKDGNLDESHEDDMKTKTHDDSESLSDIDDLEVDSYLHNEEEKHYKKIIWENMNREYLEEQAAKEAAAAAAKKFAEANCSEEELAAREFAKSAADAVAKSRKEMRQKRAQEAKNSGPAQSAIEATRQMLRTKRLSSKVNYDRLEKLFGDPVSTENPKKVRFDPSLDNDENTESKLEEKLKDDDAVGVEDEVEDGDMTGEYEDNMYQENGDEAYEDEYYDDGDY 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03411 794 Gene3D Single helix bin 588 639 - -
Aip10g03411 794 MobiDBLite consensus disorder prediction 726 756 - -
Aip10g03411 794 SUPERFAMILY Cyclin-like 281 370 IPR036915 -
Aip10g03411 794 PRINTS Transcription initiation factor IIB signature 326 345 IPR000812 GO:0006352|GO:0070897
Aip10g03411 794 PRINTS Transcription initiation factor IIB signature 420 436 IPR000812 GO:0006352|GO:0070897
Aip10g03411 794 PRINTS Transcription initiation factor IIB signature 223 243 IPR000812 GO:0006352|GO:0070897
Aip10g03411 794 CDD CYCLIN 380 457 IPR013763 -
Aip10g03411 794 Gene3D - 380 464 - -
Aip10g03411 794 MobiDBLite consensus disorder prediction 757 794 - -
Aip10g03411 794 MobiDBLite consensus disorder prediction 516 546 - -
Aip10g03411 794 MobiDBLite consensus disorder prediction 552 595 - -
Aip10g03411 794 Gene3D - 271 372 - -
Aip10g03411 794 MobiDBLite consensus disorder prediction 671 693 - -
Aip10g03411 794 Pfam Transcription factor TFIIB repeat 276 364 IPR013150 GO:0017025
Aip10g03411 794 Pfam Transcription factor TFIIB repeat 377 451 IPR013150 GO:0017025
Aip10g03411 794 Pfam Brf1-like TBP-binding domain 597 718 IPR011665 -
Aip10g03411 794 MobiDBLite consensus disorder prediction 509 597 - -
Aip10g03411 794 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 208 722 IPR000812 GO:0006352|GO:0070897
Aip10g03411 794 SUPERFAMILY Cyclin-like 379 450 IPR036915 -
Aip10g03411 794 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 208 722 IPR029529 GO:0000126|GO:0000995|GO:0006383
Aip10g03411 794 MobiDBLite consensus disorder prediction 717 794 - -
Aip10g03411 794 CDD CYCLIN 303 351 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03411 Aip-Chr10 132599786 132615070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03411 208 703 Inorganic Solute Cotransporters AT2G01280 37.977 6.65e-87 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03411 K15196 - gmx:100789154 685.641