Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03395 ATGGAAGGCCAACACCACTCATTGCATAATCTAAGGATGCATAACAGCTGTGATTCGGTTACATCCTTCTCGCTGGATTCCTTTCCAAATCTCGTGCGTGTTTATATAAGCGAGTTTGAAAAGATGGAGTCTCTGTTGGTGTCACGCTCTCTTTCATGTCTCCGTTCTTTATATATAAAGAATTGTGGGAGTTTGAAATCCCTGCAGACGCTATGGATGGCATCACCTCAGCTAGAACATCTCACATTACTTGGTTGCCCAGAGATTGAATTGTGTGCTACGGGGGATCCACAGCGTAGCTTGAGATCTCTTACCATCAGCTACTGCGAGAAACAACTCAGCTGTGTAGCATCGCAATTTCATGGGCTTACTCATCTTTGGATTGAAGGTAAATGTGAGAGTGTGAAGTGTCTCCCCAAGGAAGGTTGGTTGCCTGCCACCCTTGAGTCTCTCTCTCTGATGAGCATTGAAAGTGTGGAGATGTTGGAATGCAAGGGACTTGCCCACCTCACCTCCCTCCAACAATTGTCTATTTATAAATGTTACAATTTGGAGAACATTGACGGAGAGAAGCTGCCTGCCTCTCTTTTACGACTCAGCATCTCTAAAAGCCCTTTGGGTAAACGGTGTGAGATGAAGGACCCGCAGAAAGCAACTGAGCAACGAGGGCCAATCATGGACACAGTGATTGATATTGAGAGCAGCCTCAATGAGCTTCATCAAGTGTTATTGGACATGGCTGTTTTGGTCCAATCACAAGGTAAGCAACTCAATGACATAGAGAGCCACGTGGCAAGAGCCAATTCGTACATCTGCCTTGGGTCCGGCAGTTTCAGTTTGCAAGGATGCACCAGAAGAATACCGGAAGTCCACCTTCATTGCCATCATAATATTGATTAG 900 0.4567 MEGQHHSLHNLRMHNSCDSVTSFSLDSFPNLVRVYISEFEKMESLLVSRSLSCLRSLYIKNCGSLKSLQTLWMASPQLEHLTLLGCPEIELCATGDPQRSLRSLTISYCEKQLSCVASQFHGLTHLWIEGKCESVKCLPKEGWLPATLESLSLMSIESVEMLECKGLAHLTSLQQLSIYKCYNLENIDGEKLPASLLRLSISKSPLGKRCEMKDPQKATEQRGPIMDTVIDIESSLNELHQVLLDMAVLVQSQGKQLNDIESHVARANSYICLGSGSFSLQGCTRRIPEVHLHCHHNID 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03395 299 Gene3D - 228 278 - -
Aip10g03395 299 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 227 281 IPR000727 -
Aip10g03395 299 SUPERFAMILY RNI-like 6 211 - -
Aip10g03395 299 Gene3D Ribonuclease Inhibitor 3 95 IPR032675 -
Aip10g03395 299 Gene3D Ribonuclease Inhibitor 96 215 IPR032675 -
Aip10g03395 299 PANTHER SYNTAXIN 227 274 IPR045242 -
Aip10g03395 299 CDD SNARE_syntaxin1-like 227 274 - -
Aip10g03395 299 PANTHER T-SNARE-RELATED 227 274 - -
Aip10g03395 299 SMART tSNARE_6 212 283 IPR000727 -
Aip10g03395 299 Pfam Syntaxin 227 254 IPR006011 GO:0016020
Aip10g03395 299 SUPERFAMILY t-snare proteins 227 271 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03395 Aip-Chr10 132454384 132456118 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03395 216 275 SNARE and Associated Proteins AT3G11820 54.167 1.49e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03395 - - aip:107628009 286.189