Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip10g03395 | ATGGAAGGCCAACACCACTCATTGCATAATCTAAGGATGCATAACAGCTGTGATTCGGTTACATCCTTCTCGCTGGATTCCTTTCCAAATCTCGTGCGTGTTTATATAAGCGAGTTTGAAAAGATGGAGTCTCTGTTGGTGTCACGCTCTCTTTCATGTCTCCGTTCTTTATATATAAAGAATTGTGGGAGTTTGAAATCCCTGCAGACGCTATGGATGGCATCACCTCAGCTAGAACATCTCACATTACTTGGTTGCCCAGAGATTGAATTGTGTGCTACGGGGGATCCACAGCGTAGCTTGAGATCTCTTACCATCAGCTACTGCGAGAAACAACTCAGCTGTGTAGCATCGCAATTTCATGGGCTTACTCATCTTTGGATTGAAGGTAAATGTGAGAGTGTGAAGTGTCTCCCCAAGGAAGGTTGGTTGCCTGCCACCCTTGAGTCTCTCTCTCTGATGAGCATTGAAAGTGTGGAGATGTTGGAATGCAAGGGACTTGCCCACCTCACCTCCCTCCAACAATTGTCTATTTATAAATGTTACAATTTGGAGAACATTGACGGAGAGAAGCTGCCTGCCTCTCTTTTACGACTCAGCATCTCTAAAAGCCCTTTGGGTAAACGGTGTGAGATGAAGGACCCGCAGAAAGCAACTGAGCAACGAGGGCCAATCATGGACACAGTGATTGATATTGAGAGCAGCCTCAATGAGCTTCATCAAGTGTTATTGGACATGGCTGTTTTGGTCCAATCACAAGGTAAGCAACTCAATGACATAGAGAGCCACGTGGCAAGAGCCAATTCGTACATCTGCCTTGGGTCCGGCAGTTTCAGTTTGCAAGGATGCACCAGAAGAATACCGGAAGTCCACCTTCATTGCCATCATAATATTGATTAG | 900 | 0.4567 | MEGQHHSLHNLRMHNSCDSVTSFSLDSFPNLVRVYISEFEKMESLLVSRSLSCLRSLYIKNCGSLKSLQTLWMASPQLEHLTLLGCPEIELCATGDPQRSLRSLTISYCEKQLSCVASQFHGLTHLWIEGKCESVKCLPKEGWLPATLESLSLMSIESVEMLECKGLAHLTSLQQLSIYKCYNLENIDGEKLPASLLRLSISKSPLGKRCEMKDPQKATEQRGPIMDTVIDIESSLNELHQVLLDMAVLVQSQGKQLNDIESHVARANSYICLGSGSFSLQGCTRRIPEVHLHCHHNID | 299 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip10g03395 | 299 | Gene3D | - | 228 | 278 | - | - | |
Aip10g03395 | 299 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 227 | 281 | IPR000727 | - | |
Aip10g03395 | 299 | SUPERFAMILY | RNI-like | 6 | 211 | - | - | |
Aip10g03395 | 299 | Gene3D | Ribonuclease Inhibitor | 3 | 95 | IPR032675 | - | |
Aip10g03395 | 299 | Gene3D | Ribonuclease Inhibitor | 96 | 215 | IPR032675 | - | |
Aip10g03395 | 299 | PANTHER | SYNTAXIN | 227 | 274 | IPR045242 | - | |
Aip10g03395 | 299 | CDD | SNARE_syntaxin1-like | 227 | 274 | - | - | |
Aip10g03395 | 299 | PANTHER | T-SNARE-RELATED | 227 | 274 | - | - | |
Aip10g03395 | 299 | SMART | tSNARE_6 | 212 | 283 | IPR000727 | - | |
Aip10g03395 | 299 | Pfam | Syntaxin | 227 | 254 | IPR006011 | GO:0016020 | |
Aip10g03395 | 299 | SUPERFAMILY | t-snare proteins | 227 | 271 | IPR010989 | GO:0016020|GO:0016192 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip10g03395 | Aip-Chr10 | 132454384 | 132456118 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip10g03395 | 216 | 275 | SNARE and Associated Proteins | AT3G11820 | 54.167 | 1.49e-14 | 70.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip10g03395 | - | - | aip:107628009 | 286.189 |