Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03393 ATGACTAAAGTGAAAGCAACTGAGCAAGCAGGGACAATCATGGACACAGTCCAAGAGATTCAAGAGCGGCATGACACGCTGATTGATATAGAGAGGAGCCCCAATGAACTTCATCAACTGTTCTTGGACATGACTGTTTTGGTCCAATCACAAGGTAAGCAACTCAATGACATACAGAGCCAATTCGTATGTCTGCGGTGGGTCCATCCGTTCCAGTTTGCAAGGAAGCACCAGATGAATACCGCAAGTCCACCTTCATTGCCTTCATAA 270 0.4593 MTKVKATEQAGTIMDTVQEIQERHDTLIDIERSPNELHQLFLDMTVLVQSQGKQLNDIQSQFVCLRWVHPFQFARKHQMNTASPPSLPS 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03393 89 PANTHER SYNTAXIN 11 60 IPR045242 -
Aip10g03393 89 Gene3D - 14 77 - -
Aip10g03393 89 SUPERFAMILY t-snare proteins 11 60 IPR010989 GO:0016020|GO:0016192
Aip10g03393 89 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 17 62 IPR000727 -
Aip10g03393 89 PANTHER T-SNARE-RELATED 11 60 - -
Aip10g03393 89 Pfam Syntaxin 8 52 IPR006011 GO:0016020
Aip10g03393 89 CDD SNARE_syntaxin1-like 16 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03393 Aip-Chr10 132446395 132446833 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03393 11 81 SNARE and Associated Proteins AT1G61290 50.649 1.03e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03393 K08486 - ahf:112772691 95.1301