Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03382 ATGGCTTCTCTATCTACCTTCTCCAACTTCCTCACTTTCTTATTCCCGCCAAAATCACAACCACCACCGCCACCACCACTATCACCACCGCCAAACCTCACCATCCGCAAACCATTACACCACGTGACGCCACTGGATCACTCCGATCAAACTCCACCTTATTCTTGCTCATCGTCTCCGTCGTCGCTGTCGCTGGCGTCATCCAAGAGTGCAGAAGGAGGAGGTACCACGAAGACACACAGGACAAGCGGAAGCGCAAGTCACGTGAGGCTGCTAAGCGTAACCGCAGAAGGCGTCCACAGACTCTACACTTTTTGCAAACCAGAAAGGCAGAAAGCGAGAAAAGTTGAACAGAGCAGAGCACAACAGAGCTTCAGGCAGCGGCAGGCAGTGAGTGGCAATCTTCAGGCAAGGGTGACACTTGAGAACTACTACCAGTACCGGCATGTAGACAAACCAGGTTGGCAACTTGGATGGCAATGGGCTAATGATGAAGTTATATGGTCAATAAAGGGTGCGGTTGCAACAGATCAAGGCAACTGCTCTTCTTACACATCTCAGTTACCACATTCTTGCAAGAAAGATCCTCTCATAGTTGATCTTCCGGCCGATGTGTCGCCGGAGAGCAGGTCAGAACACTGCTGCAACGGCGGCATCCTCTCGGCTCGAGCCATCGATCCTTTCAGCTCATTGACTTTGTTTGAGCTTGAAGTACGCAACTTGGGGCAATACCCTCTTGGACAAGCACCTAATAATCTCACACTCTTAGCCCCTGGTCCTGGCTATACTTGTTCCCCTCTTCTTCAGACTGATCCCACTGTCATCTCCTCTTTTAATGGACAAAGACAAGTTCCTGCTCTCAGAACGTGGAAGTCAGCATGTACATACTCCAACTTTATGGCAAATAAGTCACCAATATGCTGTGTATCGCTCTCAACATTTTACAACCCTATGATCACACCATGCCCTGATTGCAGCTGTGGATGCAGCGAAGCAGACAAAGCTTCCAAGTCTTGCATAAGTTTGGGAGCAACTACTCTAACTGGAATGTGCTTCTCCAACATCCTGCCTTCTCCCAGAATGCAACTTCTTATAGTTTCAACACTGCCAAACTTCCCCTTGACTTTCAAGATGGAGTTTCTCTGTTTTGGGGGATTGATTATTACAACACCGAACTAG 1179 0.4869 MASLSTFSNFLTFLFPPKSQPPPPPPLSPPPNLTIRKPLHHVTPLDHSDQTPPYSCSSSPSSLSLASSKSAEGGGTTKTHRTSGSASHVRLLSVTAEGVHRLYTFCKPERQKARKVEQSRAQQSFRQRQAVSGNLQARVTLENYYQYRHVDKPGWQLGWQWANDEVIWSIKGAVATDQGNCSSYTSQLPHSCKKDPLIVDLPADVSPESRSEHCCNGGILSARAIDPFSSLTLFELEVRNLGQYPLGQAPNNLTLLAPGPGYTCSPLLQTDPTVISSFNGQRQVPALRTWKSACTYSNFMANKSPICCVSLSTFYNPMITPCPDCSCGCSEADKASKSCISLGATTLTGMCFSNILPSPRMQLLIVSTLPNFPLTFKMEFLCFGGLIITTPN 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03382 392 Pfam COBRA-like protein 136 297 IPR006918 GO:0010215|GO:0031225
Aip10g03382 392 MobiDBLite consensus disorder prediction 48 87 - -
Aip10g03382 392 MobiDBLite consensus disorder prediction 15 87 - -
Aip10g03382 392 PANTHER PROTEIN COBRA 130 350 IPR006918 GO:0010215|GO:0031225
Aip10g03382 392 MobiDBLite consensus disorder prediction 16 33 - -
Aip10g03382 392 PANTHER COBRA-LIKE PROTEIN 130 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03382 Aip-Chr10 132328939 132332810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03382 137 341 COBRA Gene Family AT3G29810 47.573 7.19e-63 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03382 - - vra:106760500 330.872