Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03371 ATGGAACAAAAAACAGCTACCTCCAACAGCGTCTTAATTGACCCAAGCAACGGTTTCAACCGCGCTACCAGAACATTCCACAGCCTAAAACCCCCTCTCCGCCTCCCTCCTCCACATGCCACCGTCTCCGCACCATCATACGTTCTCTCTCTCCGTCGCAACTCACCTTGGTCCGACTCCGTCACCGCTCTCATCGACTCTGCCACCGGCCGCCACCTCTCCTACGCCGATTTCATCCGCCGTTCAGAAACCCTAGCTGCCAACCTTACATCCCTCTTCAAACTCTCCAAAAACGACACCGCTTTGGTCCTCTCTCCAAACCTCCTCCACGTTCCTATCCTCCACTTCGCGCTCCTCTCCCTCGGCGTCGTTGTTTCGCCGGCAAATCCGCTTGCCACGCGCTCCGATCTCACGCGCATCATCCGCCTTAGCAAACCTACCATCGCATTCGCCACGTCATCAGCGGCTAAGAACCTTCCCAATGAGTTCCGTCACGGGACCGTCCTCATCGACTCGCCCGAGTTCGATTCGCTCATGACAGCGAGTCGACCCGGCGCCAAACTCGAACAAGTGGAGGTGAGTCAGTCTGACGTGGCAGCTATTCTTTACTCTTCAGGAACCACAGGGAAGGTGAAGGGAGTGATGCTGACTCATCGGAACCTGATTGCAATGGCAGGGGTATACAATGTCGTTCGGGCGCAGAGGGAGAAGCCCGCCGTGTTCCTATATACGGTGCCGTTTTTCCACGTGTTCGGGTTTACGCTCTCGCTGAGGGCGGTGGTGCTATTGGAAACGGTGGTGTTAATGGAGAGATTCGGGTTGAGGAGGATGATGGAGGCGATAGAGAGGTTTCGAGTTACGCACATGGCGGCGGTGCCGTCAGTAATGGTAGCGATGATGAAAGACGACTTGACGGCGGCTTATGATTTAAGGTCGTTGGAATGCGTCGCTTGCGGCGGGGCTCCTCTCGGAAAGGATACCGCCGCGGCGTTCAAAACAAAGTTTCCCAAAGTGTTAATCTTGCAGGGATACGGTCTAACGGAGTCAACAGCAGGGGTTGCCCGAACAACGAATCCGGAGGAGGCAAGCCGATCAAGGACAACAGGTAAGCTGGTGTCAGGTGTTGAGGCTAAAATTGTAAATCCAGACACAGGGGAGCCCATGTTTCCTGGTGATCAAGGGGAACTTTGGCTCAGAGGACCTTCAATTATGAAAGCAGGTTATGTTGGTGACCCAGAAGCAACTTTAGCAAGCTTGGTGAATGGGTGGTTAAGGACTGGGGACCTCTGCTATTTCGATGAAGAGGGTTTCCTCTATGTCGTTGACAGGTTGAAAGAGTTGATCAAATATAAAGGCTACCAGGTGGCCCCTGCAGAATTAGAACAAGTGCTCCATTCGCACCCTGAGATAAGCGATGCGGCAGTTATTCCGTAA 1434 0.5377 MEQKTATSNSVLIDPSNGFNRATRTFHSLKPPLRLPPPHATVSAPSYVLSLRRNSPWSDSVTALIDSATGRHLSYADFIRRSETLAANLTSLFKLSKNDTALVLSPNLLHVPILHFALLSLGVVVSPANPLATRSDLTRIIRLSKPTIAFATSSAAKNLPNEFRHGTVLIDSPEFDSLMTASRPGAKLEQVEVSQSDVAAILYSSGTTGKVKGVMLTHRNLIAMAGVYNVVRAQREKPAVFLYTVPFFHVFGFTLSLRAVVLLETVVLMERFGLRRMMEAIERFRVTHMAAVPSVMVAMMKDDLTAAYDLRSLECVACGGAPLGKDTAAAFKTKFPKVLILQGYGLTESTAGVARTTNPEEASRSRTTGKLVSGVEAKIVNPDTGEPMFPGDQGELWLRGPSIMKAGYVGDPEATLASLVNGWLRTGDLCYFDEEGFLYVVDRLKELIKYKGYQVAPAELEQVLHSHPEISDAAVIP 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03371 477 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 14 477 - -
Aip10g03371 477 ProSitePatterns Putative AMP-binding domain signature. 201 212 IPR020845 -
Aip10g03371 477 SUPERFAMILY Acetyl-CoA synthetase-like 60 477 - -
Aip10g03371 477 Pfam AMP-binding enzyme 61 450 IPR000873 -
Aip10g03371 477 Gene3D - 446 477 IPR045851 -
Aip10g03371 477 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 477 - -
Aip10g03371 477 Gene3D - 38 445 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03371 Aip-Chr10 132205934 132210638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03371 5 477 Monolignol Biosynthesis Gene Families AT5G63380 50.617 2.55e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03371 - - gmx:100801143 620.542